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  5. AMTR_s00019p00171550

AMTR_s00019p00171550 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.171

Description : Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type 1,4-beta-glucan synthase


Gene families : OG0000194 (Archaeplastida) Phylogenetic Tree(s): OG0000194_tree ,
OG_05_0000643 (LandPlants) Phylogenetic Tree(s): OG_05_0000643_tree ,
OG_06_0000676 (SeedPlants) Phylogenetic Tree(s): OG_06_0000676_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00171550
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT1G23480 ATCSLA3, CSLA03,... cellulose synthase-like A3 0.03 Archaeplastida
AT2G24630 ATCSLC8, ATCSLC08, CSLC08 Glycosyl transferase family 2 protein 0.03 Archaeplastida
AT4G07960 ATCSLC12, CSLC12 Cellulose-synthase-like C12 0.03 Archaeplastida
AT5G16190 CSLA11, ATCSLA11 cellulose synthase like A11 0.03 Archaeplastida
GSVIVT01032523001 No alias Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.04 Archaeplastida
GSVIVT01033168001 No alias Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.04 Archaeplastida
GSVIVT01033767001 No alias Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.04 Archaeplastida
Gb_24488 No alias 1,4-beta-glucan synthase (CSLC) 0.02 Archaeplastida
Gb_27616 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.02 Archaeplastida
LOC_Os02g09930.1 No alias mannan synthase (CSLA) 0.02 Archaeplastida
LOC_Os06g42020.1 No alias mannan synthase (CSLA) 0.04 Archaeplastida
MA_10426467g0020 No alias Glucomannan 4-beta-mannosyltransferase 9 OS=Arabidopsis... 0.03 Archaeplastida
MA_7990944g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_96942g0010 No alias mannan synthase (CSLA) 0.04 Archaeplastida
Mp1g22770.1 No alias mannan synthase (CSLA) 0.02 Archaeplastida
Pp3c14_13750V3.1 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.02 Archaeplastida
Pp3c17_19670V3.1 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.02 Archaeplastida
Smo140200 No alias Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.03 Archaeplastida
Smo230176 No alias Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.04 Archaeplastida
Solyc05g055410.3.1 No alias mannan synthase (CSLA) 0.05 Archaeplastida
Solyc08g006310.3.1 No alias 1,4-beta-glucan synthase (CSLC) 0.02 Archaeplastida
Solyc10g083670.3.1 No alias mannan synthase (CSLA) 0.03 Archaeplastida
Zm00001e015809_P002 No alias mannan synthase (CSLA) 0.02 Archaeplastida
Zm00001e025054_P003 No alias mannan synthase (CSLA) 0.03 Archaeplastida
Zm00001e037543_P001 No alias mannan synthase (CSLA) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!