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  5. Smo58368

Smo58368


Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS6 component


Gene families : OG0006609 (Archaeplastida) Phylogenetic Tree(s): OG0006609_tree ,
OG_05_0005797 (LandPlants) Phylogenetic Tree(s): OG_05_0005797_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo58368
Cluster HCCA: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00220150 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.04 Archaeplastida
AT1G64510 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.05 Archaeplastida
Cre12.g520600 No alias Protein biosynthesis.organelle translation... 0.06 Archaeplastida
GSVIVT01019593001 No alias Protein biosynthesis.organelle translation... 0.04 Archaeplastida
Gb_07402 No alias component psRPS6 of small ribosomal subunit proteome 0.02 Archaeplastida
Gb_07403 No alias component psRPS6 of small ribosomal subunit proteome 0.04 Archaeplastida
LOC_Os03g62630.1 No alias component psRPS6 of small ribosomal subunit proteome 0.04 Archaeplastida
MA_10429326g0010 No alias component psRPS6 of small ribosomal subunit proteome 0.05 Archaeplastida
Mp4g07210.1 No alias component psRPS6 of small ribosomal subunit proteome 0.06 Archaeplastida
Pp3c15_17560V3.1 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.05 Archaeplastida
Pp3c9_9180V3.1 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.03 Archaeplastida
Solyc08g082690.2.1 No alias component psRPS6 of small ribosomal subunit proteome 0.06 Archaeplastida
Zm00001e006321_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0019843 rRNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004097 catechol oxidase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0006353 DNA-templated transcription, termination IEP Neighborhood
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000529 Ribosomal_S6 12 110
No external refs found!