AMTR_s00019p00178690 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.182

Description : Solute transport.channels.GLR ligand-gated cation channel


Gene families : OG0000085 (Archaeplastida) Phylogenetic Tree(s): OG0000085_tree ,
OG_05_0000261 (LandPlants) Phylogenetic Tree(s): OG_05_0000261_tree ,
OG_06_0000114 (SeedPlants) Phylogenetic Tree(s): OG_06_0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00178690
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00180760 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.04 Archaeplastida
AMTR_s00019p00182190 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.04 Archaeplastida
AT2G24710 GLR2.3, ATGLR2.3 glutamate receptor 2.3 0.03 Archaeplastida
AT4G31710 GLR2.4, ATGLR2.4 glutamate receptor 2.4 0.03 Archaeplastida
AT5G11210 GLR2.5, ATGLR2.5 glutamate receptor 2.5 0.04 Archaeplastida
AT5G48400 ATGLR1.2, GLR1.2 Glutamate receptor family protein 0.04 Archaeplastida
AT5G48410 ATGLR1.3, GLR1.3 glutamate receptor 1.3 0.03 Archaeplastida
GSVIVT01014245001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.06 Archaeplastida
GSVIVT01021155001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.04 Archaeplastida
GSVIVT01029195001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
GSVIVT01030600001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
GSVIVT01030602001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
GSVIVT01033150001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.05 Archaeplastida
GSVIVT01033155001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
GSVIVT01033156001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
Gb_20613 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
Gb_27767 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
Gb_28362 No alias ligand-gated cation channel (GLR) 0.05 Archaeplastida
LOC_Os07g01310.1 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
LOC_Os09g26144.1 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
MA_10428521g0010 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
MA_10429132g0010 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
MA_141267g0010 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
MA_23282g0010 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
MA_339780g0010 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
MA_43501g0010 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
MA_6222576g0010 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
MA_88153g0010 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
MA_9039812g0010 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
MA_958834g0010 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
MA_9796468g0010 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
MA_9896648g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp1g01040.1 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
Solyc06g063170.3.1 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
Solyc06g063180.3.1 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
Solyc06g063190.3.1 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
Solyc06g063200.2.1 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
Solyc06g063210.3.1 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
Solyc08g006500.4.1 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
Zm00001e009847_P001 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
Zm00001e016082_P001 No alias ligand-gated cation channel (GLR) 0.05 Archaeplastida
Zm00001e023728_P001 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
Zm00001e032646_P001 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004970 ionotropic glutamate receptor activity IEA Interproscan
MF GO:0005215 transporter activity IEA Interproscan
MF GO:0005234 extracellularly glutamate-gated ion channel activity IEA Interproscan
BP GO:0006810 transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
CC GO:0030288 outer membrane-bounded periplasmic space IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 464 757
IPR001828 ANF_lig-bd_rcpt 12 351
IPR001320 Iontro_rcpt 537 793
No external refs found!