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  5. AMTR_s00019p00180760

AMTR_s00019p00180760 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.188

Description : Solute transport.channels.GLR ligand-gated cation channel


Gene families : OG0000085 (Archaeplastida) Phylogenetic Tree(s): OG0000085_tree ,
OG_05_0000261 (LandPlants) Phylogenetic Tree(s): OG_05_0000261_tree ,
OG_06_0000114 (SeedPlants) Phylogenetic Tree(s): OG_06_0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00180760
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00178690 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.04 Archaeplastida
AMTR_s00019p00179820 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.07 Archaeplastida
AMTR_s00019p00186040 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.04 Archaeplastida
AMTR_s00021p00172130 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.05 Archaeplastida
AMTR_s00021p00176450 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.05 Archaeplastida
AMTR_s00130p00078370 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT2G24710 GLR2.3, ATGLR2.3 glutamate receptor 2.3 0.04 Archaeplastida
AT2G24720 GLR2.2, ATGLR2.2 glutamate receptor 2.2 0.04 Archaeplastida
AT2G29100 ATGLR2.9, GLR2.9 glutamate receptor 2.9 0.02 Archaeplastida
AT2G29110 GLR2.8, ATGLR2.8 glutamate receptor 2.8 0.06 Archaeplastida
AT2G29120 GLR2.7, ATGLR2.7 glutamate receptor 2.7 0.04 Archaeplastida
AT2G32400 GLR3.7, ATGLR3.7, GLR5 glutamate receptor 5 0.02 Archaeplastida
AT3G04110 ATGLR1.1, GLR1.1, GLR1 glutamate receptor 1.1 0.02 Archaeplastida
AT4G31710 GLR2.4, ATGLR2.4 glutamate receptor 2.4 0.02 Archaeplastida
AT5G11180 ATGLR2.6, GLR2.6 glutamate receptor 2.6 0.04 Archaeplastida
AT5G11210 GLR2.5, ATGLR2.5 glutamate receptor 2.5 0.07 Archaeplastida
AT5G27100 GLR2.1, ATGLR2.1 glutamate receptor 2.1 0.02 Archaeplastida
AT5G48400 ATGLR1.2, GLR1.2 Glutamate receptor family protein 0.06 Archaeplastida
AT5G48410 ATGLR1.3, GLR1.3 glutamate receptor 1.3 0.05 Archaeplastida
GSVIVT01014245001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.04 Archaeplastida
GSVIVT01021155001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.02 Archaeplastida
GSVIVT01021161001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.02 Archaeplastida
GSVIVT01022297001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
GSVIVT01030602001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.02 Archaeplastida
GSVIVT01033132001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.01 Archaeplastida
GSVIVT01033137001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
GSVIVT01033150001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.05 Archaeplastida
GSVIVT01033156001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
Gb_09070 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
Gb_20613 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
Gb_27767 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
Gb_28362 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
Gb_28364 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
LOC_Os02g54640.1 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
LOC_Os06g09050.1 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
LOC_Os09g26144.1 No alias ligand-gated cation channel (GLR) 0.05 Archaeplastida
MA_10226232g0010 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
MA_10428186g0010 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
MA_10428521g0010 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
MA_10429132g0010 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
MA_110963g0010 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
MA_141267g0010 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
MA_23282g0010 No alias ligand-gated cation channel (GLR) 0.01 Archaeplastida
MA_339780g0010 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
MA_391859g0010 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
MA_43501g0010 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
MA_46902g0010 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
MA_7872524g0010 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
MA_88153g0010 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
MA_9039812g0010 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
MA_958834g0010 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
MA_9796468g0010 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
MA_9896648g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c12_5540V3.1 No alias glutamate receptor 3.3 0.02 Archaeplastida
Pp3c15_25650V3.1 No alias glutamate receptor 3.3 0.02 Archaeplastida
Solyc02g077290.2.1 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
Solyc04g078860.4.1 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
Solyc05g045650.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc06g063180.3.1 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
Solyc06g063190.3.1 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
Solyc06g063200.2.1 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
Solyc06g063210.3.1 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
Solyc07g052400.3.1 No alias ligand-gated cation channel (GLR) 0.05 Archaeplastida
Solyc08g006500.4.1 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
Zm00001e009847_P001 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
Zm00001e023728_P001 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0047134 protein-disulfide reductase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001828 ANF_lig-bd_rcpt 10 320
No external refs found!