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  5. AMTR_s00019p00183450

AMTR_s00019p00183450 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.196

Description : Solute transport.channels.GLR ligand-gated cation channel


Gene families : OG0000085 (Archaeplastida) Phylogenetic Tree(s): OG0000085_tree ,
OG_05_0000261 (LandPlants) Phylogenetic Tree(s): OG_05_0000261_tree ,
OG_06_0000114 (SeedPlants) Phylogenetic Tree(s): OG_06_0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00183450
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00172130 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
GSVIVT01014244001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.04 Archaeplastida
GSVIVT01033129001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.02 Archaeplastida
LOC_Os06g09090.1 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
LOC_Os09g31160.1 No alias ligand-gated cation channel (GLR) 0.06 Archaeplastida
MA_10428186g0020 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
MA_10434521g0010 No alias ligand-gated cation channel (GLR) 0.05 Archaeplastida
MA_391859g0010 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
Solyc06g063170.3.1 No alias ligand-gated cation channel (GLR) 0.07 Archaeplastida
Solyc06g063180.3.1 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
Zm00001e013021_P001 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
Zm00001e023728_P001 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008219 cell death IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016841 ammonia-lyase activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001828 ANF_lig-bd_rcpt 3 305
No external refs found!