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  5. AMTR_s00019p00183760

AMTR_s00019p00183760 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.198

Description : Solute transport.channels.GLR ligand-gated cation channel


Gene families : OG0000085 (Archaeplastida) Phylogenetic Tree(s): OG0000085_tree ,
OG_05_0000261 (LandPlants) Phylogenetic Tree(s): OG_05_0000261_tree ,
OG_06_0000114 (SeedPlants) Phylogenetic Tree(s): OG_06_0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00183760
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01014244001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
LOC_Os06g06130.1 No alias ligand-gated cation channel (GLR) 0.07 Archaeplastida
MA_10430853g0010 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
MA_10434521g0010 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
Zm00001e032648_P001 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004970 ionotropic glutamate receptor activity IEA Interproscan
MF GO:0005215 transporter activity IEA Interproscan
MF GO:0005234 extracellularly glutamate-gated ion channel activity IEA Interproscan
BP GO:0006810 transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
CC GO:0030288 outer membrane-bounded periplasmic space IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009108 coenzyme biosynthetic process IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
InterPro domains Description Start Stop
IPR001828 ANF_lig-bd_rcpt 52 398
IPR001638 Solute-binding_3/MltF_N 491 786
IPR001320 Iontro_rcpt 645 817
No external refs found!