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  5. AT1G34380

AT1G34380


Description : 5'-3' exonuclease family protein


Gene families : OG0005389 (Archaeplastida) Phylogenetic Tree(s): OG0005389_tree ,
OG_05_0004416 (LandPlants) Phylogenetic Tree(s): OG_05_0004416_tree ,
OG_06_0010511 (SeedPlants) Phylogenetic Tree(s): OG_06_0010511_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G34380
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Zm00001e019106_P003 No alias plastidial exonuclease 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000082 G1/S transition of mitotic cell cycle IEP Neighborhood
MF GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
CC GO:0000139 Golgi membrane IEP Neighborhood
CC GO:0000164 protein phosphatase type 1 complex IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0003948 N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity IEP Neighborhood
MF GO:0003991 acetylglutamate kinase activity IEP Neighborhood
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Neighborhood
MF GO:0004067 asparaginase activity IEP Neighborhood
MF GO:0004124 cysteine synthase activity IEP Neighborhood
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Neighborhood
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Neighborhood
MF GO:0004564 beta-fructofuranosidase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0004722 protein serine/threonine phosphatase activity IEP Neighborhood
MF GO:0004737 pyruvate decarboxylase activity IEP Neighborhood
MF GO:0005343 organic acid:sodium symporter activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0005987 sucrose catabolic process IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006516 glycoprotein catabolic process IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006525 arginine metabolic process IEP Neighborhood
BP GO:0006526 arginine biosynthetic process IEP Neighborhood
BP GO:0006528 asparagine metabolic process IEP Neighborhood
BP GO:0006530 asparagine catabolic process IEP Neighborhood
BP GO:0006591 ornithine metabolic process IEP Neighborhood
BP GO:0006651 diacylglycerol biosynthetic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006788 heme oxidation IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006848 pyruvate transport IEP Neighborhood
BP GO:0006849 plasma membrane pyruvate transport IEP Neighborhood
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008195 phosphatidate phosphatase activity IEP Neighborhood
MF GO:0008508 bile acid:sodium symporter activity IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009065 glutamine family amino acid catabolic process IEP Neighborhood
BP GO:0009068 aspartate family amino acid catabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009100 glycoprotein metabolic process IEP Neighborhood
BP GO:0009313 oligosaccharide catabolic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009526 plastid envelope IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
BP GO:0009657 plastid organization IEP Neighborhood
BP GO:0009658 chloroplast organization IEP Neighborhood
BP GO:0009785 blue light signaling pathway IEP Neighborhood
CC GO:0009941 chloroplast envelope IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010024 phytochromobilin biosynthetic process IEP Neighborhood
MF GO:0010283 pinoresinol reductase activity IEP Neighborhood
MF GO:0015099 nickel cation transmembrane transporter activity IEP Neighborhood
MF GO:0015125 bile acid transmembrane transporter activity IEP Neighborhood
MF GO:0015355 secondary active monocarboxylate transmembrane transporter activity IEP Neighborhood
MF GO:0015370 solute:sodium symporter activity IEP Neighborhood
BP GO:0015675 nickel cation transport IEP Neighborhood
BP GO:0015718 monocarboxylic acid transport IEP Neighborhood
BP GO:0015805 S-adenosyl-L-methionine transport IEP Neighborhood
BP GO:0016556 mRNA modification IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016657 oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor IEP Neighborhood
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0030522 intracellular receptor signaling pathway IEP Neighborhood
CC GO:0031306 intrinsic component of mitochondrial outer membrane IEP Neighborhood
CC GO:0031307 integral component of mitochondrial outer membrane IEP Neighborhood
BP GO:0031425 chloroplast RNA processing IEP Neighborhood
CC GO:0031967 organelle envelope IEP Neighborhood
CC GO:0031975 envelope IEP Neighborhood
CC GO:0032592 integral component of mitochondrial membrane IEP Neighborhood
BP GO:0033345 asparagine catabolic process via L-aspartate IEP Neighborhood
MF GO:0034618 arginine binding IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0042168 heme metabolic process IEP Neighborhood
BP GO:0042450 arginine biosynthetic process via ornithine IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
CC GO:0044434 chloroplast part IEP Neighborhood
CC GO:0044435 plastid part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:0044770 cell cycle phase transition IEP Neighborhood
BP GO:0044772 mitotic cell cycle phase transition IEP Neighborhood
BP GO:0044843 cell cycle G1/S phase transition IEP Neighborhood
BP GO:0045962 positive regulation of development, heterochronic IEP Neighborhood
BP GO:0046339 diacylglycerol metabolic process IEP Neighborhood
BP GO:0046352 disaccharide catabolic process IEP Neighborhood
BP GO:0046443 FAD metabolic process IEP Neighborhood
BP GO:0046460 neutral lipid biosynthetic process IEP Neighborhood
BP GO:0046463 acylglycerol biosynthetic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0050833 pyruvate transmembrane transporter activity IEP Neighborhood
BP GO:0051181 cofactor transport IEP Neighborhood
BP GO:0051182 coenzyme transport IEP Neighborhood
MF GO:0051184 cofactor transmembrane transporter activity IEP Neighborhood
MF GO:0051185 coenzyme transmembrane transporter activity IEP Neighborhood
BP GO:0051202 phytochromobilin metabolic process IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
BP GO:0072387 flavin adenine dinucleotide metabolic process IEP Neighborhood
CC GO:0098573 intrinsic component of mitochondrial membrane IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:0140161 monocarboxylate:sodium symporter activity IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901475 pyruvate transmembrane transport IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP Neighborhood
BP GO:1903825 organic acid transmembrane transport IEP Neighborhood
BP GO:1905039 carboxylic acid transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR020046 5-3_exonucl_a-hlix_arch_N 102 210
No external refs found!