Smo68470

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.ERF-type transcription factor

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo68470
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method	Actions
AMTR_s00016p00238800	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00021p00185480	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00069p00141520	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00111p00113030	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00115p00032780	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00148p00084540	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00150p00091360	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT1G12610	DDF1	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G22190	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G28370	ATERF11, ERF11	ERF domain protein 11	0.03	Archaeplastida
AT1G43160	RAP2.6	related to AP2 6	0.04	Archaeplastida
AT1G44830	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G50640	ATERF3, ERF3	ethylene responsive element binding factor 3	0.03	Archaeplastida
AT1G71520	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT2G44840	ATERF13, ERF13, EREBP	ethylene-responsive element binding factor 13	0.03	Archaeplastida
AT3G15210	ATERF4, RAP2.5,...	ethylene responsive element binding factor 4	0.05	Archaeplastida
AT3G20310	ERF7, ATERF7, ATERF-7	ethylene response factor 7	0.07	Archaeplastida
AT3G23240	ERF1, ATERF1	ethylene response factor 1	0.03	Archaeplastida
AT4G13620	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT4G16750	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G17500	ERF-1, ATERF-1	ethylene responsive element binding factor 1	0.03	Archaeplastida
AT4G18450	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G27950	CRF4	cytokinin response factor 4	0.02	Archaeplastida
AT4G34410	RRTF1	redox responsive transcription factor 1	0.04	Archaeplastida
AT4G39780	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G07310	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G13330	Rap2.6L	related to AP2 6l	0.03	Archaeplastida
AT5G21960	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G47220	ERF2, ATERF2, ATERF-2	ethylene responsive element binding factor 2	0.02	Archaeplastida
AT5G61890	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
GSVIVT01015037001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01021146001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01031747001	No alias	Alpha-amylase type B isozyme OS=Hordeum vulgare	0.05	Archaeplastida	Default
GSVIVT01035502001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_01210	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_01211	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01212	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_01213	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_01215	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_01216	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_03782	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_03783	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_07474	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_08031	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_12965	No alias	Ethylene-responsive transcription factor ABR1...	0.03	Archaeplastida
Gb_17207	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_17211	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_17212	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_23321	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_24326	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_26667	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_26856	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_34846	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_36622	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_41444	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_41836	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os01g66270.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os02g06330.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
LOC_Os02g38090.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os02g52670.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
LOC_Os02g54050.1	No alias	Ethylene-responsive transcription factor ERF018...	0.04	Archaeplastida
LOC_Os04g46220.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os04g52090.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os05g27930.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os05g41780.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os08g36920.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
MA_100577g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_10209922g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10431882g0010	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_115502g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_116185g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_137148g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_16778g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_168025g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_184464g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_18454g0020	No alias	transcription factor (ERF)	0.08	Archaeplastida
MA_214532g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_28894g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_3758g0010	No alias	Ethylene-responsive transcription factor ERF013...	0.03	Archaeplastida
MA_4032g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_426919g0030	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_4481564g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_45733g0020	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_463250g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_5306433g0010	No alias	Ethylene-responsive transcription factor ERF017...	0.03	Archaeplastida
MA_5730259g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_78784g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_81029g0010	No alias	transcription factor (ERF)	0.05	Archaeplastida
MA_88g0020	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_8984558g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_9068995g0010	No alias	Ethylene-responsive transcription factor ERF016...	0.03	Archaeplastida
MA_914123g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_9304g0020	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_9565555g0010	No alias	Ethylene-responsive transcription factor ERF016...	0.03	Archaeplastida
MA_9812198g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Mp1g20040.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Mp7g09350.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Mp7g13760.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Pp3c10_20000V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c12_25330V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c1_7740V3.1	No alias	ethylene responsive element binding factor 1	0.03	Archaeplastida
Pp3c27_1350V3.1	No alias	ERF domain protein 12	0.04	Archaeplastida
Pp3c2_36690V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c3_6830V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Smo38500	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
Solyc01g108240.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc02g067020.1.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Solyc02g090770.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc03g026280.3.1	No alias	transcription factor (DREB). transcription factor (CBF/DREB1)	0.04	Archaeplastida
Solyc03g093560.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc03g093610.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc03g124110.2.1	No alias	transcription factor (DREB). transcription factor (CBF/DREB1)	0.06	Archaeplastida
Solyc04g071770.3.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc05g052050.1.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc06g035700.1.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
Solyc06g054630.3.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc06g063070.3.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc06g082590.1.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc07g053740.1.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc08g007820.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc08g007830.1.1	No alias	Dehydration-responsive element-binding protein 1F...	0.03	Archaeplastida
Solyc08g078190.2.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc09g089930.3.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc10g006130.1.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
Solyc10g009110.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc10g050960.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc10g050970.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc11g006050.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc11g042560.1.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc12g009240.1.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e006604_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e006982_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e007205_P001	No alias	Dehydration-responsive element-binding protein 1E...	0.02	Archaeplastida
Zm00001e007350_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e007352_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e013685_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e015946_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e019159_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e019567_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e021579_P001	No alias	Pathogenesis-related genes transcriptional activator...	0.02	Archaeplastida
Zm00001e023159_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e023224_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e027350_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e027351_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e032032_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e033072_P001	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Zm00001e034661_P001	No alias	Ethylene-responsive transcription factor ERF115...	0.02	Archaeplastida
Zm00001e040033_P001	No alias	No annotation	0.02	Archaeplastida
Zm00001e041539_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0016567	protein ubiquitination	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
BP	GO:0032446	protein modification by small protein conjugation	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044237	cellular metabolic process	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	71	121

External Links

No external refs found!

Smo68470

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation