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  5. AMTR_s00019p00218500

AMTR_s00019p00218500 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.270

No description available


Gene families : OG0002182 (Archaeplastida) Phylogenetic Tree(s): OG0002182_tree ,
OG_05_0002824 (LandPlants) Phylogenetic Tree(s): OG_05_0002824_tree ,
OG_06_0002009 (SeedPlants) Phylogenetic Tree(s): OG_06_0002009_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00218500
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01029186001 No alias No description available 0.03 Archaeplastida
GSVIVT01029189001 No alias No description available 0.02 Archaeplastida
LOC_Os02g54370.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os02g54390.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g54450.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os05g47880.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g09270.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g26300.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g26310.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_118743g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_119164g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_877072g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc07g018200.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc07g044820.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e009858_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e016067_P001 No alias no hits & (original description: none) 0.1 Archaeplastida
Zm00001e032341_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e034227_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e036269_P001 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!