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Description : Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana
Gene families : OG0000198 (Archaeplastida) Phylogenetic Tree(s): OG0000198_tree ,
OG_05_0000086 (LandPlants) Phylogenetic Tree(s): OG_05_0000086_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo74408 | |
| Cluster | HCCA: Cluster_107 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00111p00140430 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g01400,... | 0.03 | Archaeplastida | |
| AMTR_s00135p00057260 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g18475... | 0.02 | Archaeplastida | |
| AT1G53330 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Archaeplastida | |
| AT5G18475 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Archaeplastida | |
| AT5G64320 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Archaeplastida | |
| Gb_06893 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | Archaeplastida | |
| Gb_12002 | No alias | Pentatricopeptide repeat-containing protein At3g48810... | 0.03 | Archaeplastida | |
| Gb_14900 | No alias | Pentatricopeptide repeat-containing protein At4g20090... | 0.03 | Archaeplastida | |
| Gb_21920 | No alias | Pentatricopeptide repeat-containing protein At1g07740,... | 0.04 | Archaeplastida | |
| LOC_Os01g63400.1 | No alias | Pentatricopeptide repeat-containing protein At3g09060... | 0.02 | Archaeplastida | |
| LOC_Os05g04160.1 | No alias | Pentatricopeptide repeat-containing protein At3g48810... | 0.04 | Archaeplastida | |
| LOC_Os08g39050.1 | No alias | Pentatricopeptide repeat-containing protein At1g80150,... | 0.04 | Archaeplastida | |
| MA_128052g0010 | No alias | Pentatricopeptide repeat-containing protein At3g53700,... | 0.02 | Archaeplastida | |
| MA_17644g0010 | No alias | Pentatricopeptide repeat-containing protein At2g17525,... | 0.03 | Archaeplastida | |
| MA_525159g0010 | No alias | Pentatricopeptide repeat-containing protein At1g07740,... | 0.04 | Archaeplastida | |
| MA_57592g0010 | No alias | Pentatricopeptide repeat-containing protein At3g09060... | 0.03 | Archaeplastida | |
| MA_71816g0020 | No alias | Pentatricopeptide repeat-containing protein At3g14580,... | 0.04 | Archaeplastida | |
| MA_742945g0010 | No alias | Pentatricopeptide repeat-containing protein At5g16420,... | 0.04 | Archaeplastida | |
| MA_80720g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
| Solyc02g077650.2.1 | No alias | Pentatricopeptide repeat-containing protein At5g46100... | 0.03 | Archaeplastida | |
| Solyc09g061760.1.1 | No alias | Pentatricopeptide repeat-containing protein At2g17525,... | 0.04 | Archaeplastida | |
| Solyc11g068470.3.1 | No alias | group-II intron mitochondrial splicing factor (MISF74) | 0.03 | Archaeplastida | |
| Solyc12g035170.3.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | Archaeplastida | |
| Zm00001e011589_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Zm00001e034625_P001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0000774 | adenyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Neighborhood |
| MF | GO:0051082 | unfolded protein binding | IEP | Neighborhood |
| MF | GO:0051087 | chaperone binding | IEP | Neighborhood |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Neighborhood |
| MF | GO:0060590 | ATPase regulator activity | IEP | Neighborhood |
| MF | GO:0071949 | FAD binding | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR033443 | PPR_long | 129 | 294 |
| No external refs found! |