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  5. AMTR_s00019p00220160

AMTR_s00019p00220160 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.276

Description : Chromatin organisation.histones.H4-type histone


Gene families : OG0000170 (Archaeplastida) Phylogenetic Tree(s): OG0000170_tree ,
OG_05_0000135 (LandPlants) Phylogenetic Tree(s): OG_05_0000135_tree ,
OG_06_0000106 (SeedPlants) Phylogenetic Tree(s): OG_06_0000106_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00220160
Cluster HCCA: Cluster_265

Target Alias Description ECC score Gene Family Method Actions
AT2G28740 HIS4 histone H4 0.03 Archaeplastida
AT3G45930 No alias Histone superfamily protein 0.03 Archaeplastida
AT3G53730 No alias Histone superfamily protein 0.03 Archaeplastida
AT5G59690 No alias Histone superfamily protein 0.03 Archaeplastida
AT5G59970 No alias Histone superfamily protein 0.04 Archaeplastida
Cre06.g264600 No alias Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
Cre06.g265050 No alias Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
Cre06.g265200 No alias Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
Cre06.g265450 No alias Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
Cre06.g266600 No alias Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
Cre06.g268000 No alias Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
Cre06.g268400 No alias Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
Cre06.g271300 No alias Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
Cre06.g274150 No alias Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
Cre06.g274300 No alias Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
Cre06.g274900 No alias Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
Cre06.g275700 No alias Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
Cre06.g276650 No alias Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
Cre06.g276800 No alias Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
Cre12.g504600 No alias Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
Cre12.g504850 No alias Chromatin organisation.histones.H4-type histone 0.05 Archaeplastida
Cre12.g505450 No alias Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
Cre12.g506350 No alias Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
Cre12.g506450 No alias Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
Cre16.g649950 No alias Chromatin organisation.histones.H4-type histone 0.01 Archaeplastida
Cre16.g650250 No alias Chromatin organisation.histones.H4-type histone 0.01 Archaeplastida
Cre17.g708200 No alias Chromatin organisation.histones.H4-type histone 0.02 Archaeplastida
Cre17.g708650 No alias Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
Cre17.g709100 No alias Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
Gb_10374 No alias histone (H4) 0.06 Archaeplastida
Gb_15458 No alias histone (H4) 0.02 Archaeplastida
Gb_15459 No alias histone (H4) 0.05 Archaeplastida
Gb_20453 No alias histone (H4) 0.05 Archaeplastida
Gb_21914 No alias histone (H4) 0.03 Archaeplastida
Gb_21918 No alias histone (H4) 0.03 Archaeplastida
Gb_24017 No alias histone (H4) 0.03 Archaeplastida
LOC_Os01g61920.1 No alias histone (H4) 0.04 Archaeplastida
LOC_Os02g45940.1 No alias histone (H4) 0.02 Archaeplastida
LOC_Os03g02780.1 No alias histone (H4) 0.05 Archaeplastida
LOC_Os05g39050.1 No alias histone (H4) 0.03 Archaeplastida
LOC_Os07g36500.1 No alias histone (H4) 0.03 Archaeplastida
LOC_Os09g26340.1 No alias histone (H4) 0.05 Archaeplastida
LOC_Os09g38020.1 No alias histone (H4) 0.06 Archaeplastida
MA_10426093g0010 No alias histone (H4) 0.03 Archaeplastida
MA_10427181g0010 No alias histone (H4) 0.03 Archaeplastida
MA_10433778g0010 No alias histone (H4) 0.03 Archaeplastida
MA_116904g0010 No alias histone (H4) 0.07 Archaeplastida
MA_141877g0030 No alias histone (H4) 0.04 Archaeplastida
MA_465285g0010 No alias histone (H4) 0.03 Archaeplastida
MA_713159g0010 No alias histone (H4) 0.03 Archaeplastida
MA_74102g0010 No alias histone (H4) 0.05 Archaeplastida
MA_7644388g0010 No alias histone (H4) 0.03 Archaeplastida
MA_89764g0010 No alias histone (H4) 0.07 Archaeplastida
MA_9266178g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Mp4g03080.1 No alias histone (H4) 0.06 Archaeplastida
Mp4g13440.1 No alias histone (H4) 0.03 Archaeplastida
Mp5g16840.1 No alias histone (H4) 0.03 Archaeplastida
Pp3c13_5310V3.1 No alias Histone superfamily protein 0.02 Archaeplastida
Pp3c22_22340V3.1 No alias histone H4 0.06 Archaeplastida
Pp3c4_22160V3.1 No alias Histone superfamily protein 0.03 Archaeplastida
Pp3c7_22150V3.1 No alias histone H4 0.04 Archaeplastida
Solyc04g011390.1.1 No alias histone (H4) 0.03 Archaeplastida
Solyc05g054610.1.1 No alias histone (H4) 0.04 Archaeplastida
Solyc06g005420.1.1 No alias histone (H4) 0.04 Archaeplastida
Solyc06g005430.1.1 No alias histone (H4) 0.04 Archaeplastida
Solyc06g072240.1.1 No alias histone (H4) 0.04 Archaeplastida
Solyc06g075830.2.1 No alias histone (H4) 0.03 Archaeplastida
Solyc06g075850.1.1 No alias histone (H4) 0.03 Archaeplastida
Solyc06g075930.1.1 No alias histone (H4) 0.05 Archaeplastida
Solyc06g075960.1.1 No alias histone (H4) 0.05 Archaeplastida
Solyc11g066160.1.1 No alias histone (H4) 0.08 Archaeplastida
Solyc11g072840.1.1 No alias histone (H4) 0.03 Archaeplastida
Zm00001e007138_P001 No alias histone (H4) 0.04 Archaeplastida
Zm00001e009859_P001 No alias histone (H4) 0.03 Archaeplastida
Zm00001e016816_P001 No alias histone (H4) 0.05 Archaeplastida
Zm00001e019368_P001 No alias histone (H4) 0.1 Archaeplastida
Zm00001e023245_P001 No alias histone (H4) 0.05 Archaeplastida
Zm00001e025845_P001 No alias histone (H4) 0.04 Archaeplastida
Zm00001e027269_P001 No alias histone (H4) 0.03 Archaeplastida
Zm00001e034964_P001 No alias histone (H4) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 28 94
No external refs found!