1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. Smo74486

Smo74486


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo74486
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00032810 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT2G34000 No alias RING/U-box superfamily protein 0.04 Archaeplastida
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01023776001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_00010 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_14778 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_20844 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g11520.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os06g50370.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os08g06090.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10426834g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Mp5g08270.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc01g095810.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc02g083660.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc10g081790.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc11g005320.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc12g094690.1.1 No alias RING-H2 finger protein ATL8 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e011901_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e022175_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 20 63
No external refs found!