Smo74731

Description : Protein biosynthesis.translation initiation.mRNA loading.PABP mRNA poly-A-tail binding factor

Gene families : OG0000771 (Archaeplastida) Phylogenetic Tree(s): OG0000771_tree ,
OG_05_0000645 (LandPlants) Phylogenetic Tree(s): OG_05_0000645_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo74731
Cluster	HCCA: Cluster_197

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00051p00026490	evm_27.TU.AmTr_v1...	Protein biosynthesis.translation initiation.mRNA...	0.04	Archaeplastida
GSVIVT01009455001	No alias	Protein biosynthesis.translation initiation.mRNA...	0.03	Archaeplastida
MA_18005g0010	No alias	mRNA poly-A-tail binding factor (PABP)	0.03	Archaeplastida
Zm00001e038469_P001	No alias	mRNA poly-A-tail binding factor (PABP)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	Neighborhood
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
CC	GO:0016459	myosin complex	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044430	cytoskeletal part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002004	PABP_HYD	539	605

External Links

No external refs found!