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  5. Smo75552

Smo75552


Description : Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.LHCb1/2/3-type component


Gene families : OG0000035 (Archaeplastida) Phylogenetic Tree(s): OG0000035_tree ,
OG_05_0000162 (LandPlants) Phylogenetic Tree(s): OG_05_0000162_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo75552
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00136650 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
AMTR_s00006p00251360 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
AMTR_s00045p00069900 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
AMTR_s00045p00070890 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
AMTR_s00061p00059490 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.04 Archaeplastida
AMTR_s00076p00074970 evm_27.TU.AmTr_v1... Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. 0.03 Archaeplastida
AMTR_s00088p00153020 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
AMTR_s00131p00114510 evm_27.TU.AmTr_v1... Photosystem I chlorophyll a/b-binding protein 6,... 0.02 Archaeplastida
AMTR_s00189p00032350 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
Cre01.g066917 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
Cre03.g156900 No alias Photosynthesis.photophosphorylation.photosystem... 0.01 Archaeplastida
Cre04.g232104 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
Cre06.g272650 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.02 Archaeplastida
Cre06.g283050 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.01 Archaeplastida
Cre06.g283950 No alias Photosynthesis.photophosphorylation.photosystem... 0.01 Archaeplastida
Cre06.g284250 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
Cre12.g548400 No alias Photosynthesis.photophosphorylation.photosystem... 0.01 Archaeplastida
Cre16.g687900 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.02 Archaeplastida
GSVIVT01028204001 No alias Chlorophyll a-b binding protein 16, chloroplastic... 0.02 Archaeplastida
Gb_13368 No alias component LHCb4 of LHC-II complex 0.02 Archaeplastida
Gb_27633 No alias component LHCb6 of LHC-II complex 0.03 Archaeplastida
LOC_Os06g21590.1 No alias component LHCa1 of LHC-I complex 0.03 Archaeplastida
LOC_Os07g37240.1 No alias component LHCb4 of LHC-II complex 0.03 Archaeplastida
LOC_Os07g38960.1 No alias component LHCa2 of LHC-I complex 0.02 Archaeplastida
LOC_Os09g26810.1 No alias component LHCa6 of LHC-I complex 0.03 Archaeplastida
MA_10431300g0010 No alias Chlorophyll a-b binding protein type I, chloroplastic... 0.03 Archaeplastida
MA_10431300g0020 No alias component LHCb1/2/3 of LHC-II complex 0.03 Archaeplastida
MA_10431493g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9388552g0010 No alias Chlorophyll a-b binding protein type 2 member 2... 0.03 Archaeplastida
MA_97315g0010 No alias component LHCb1/2/3 of LHC-II complex 0.03 Archaeplastida
Mp2g13460.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
Mp7g05530.1 No alias component LHCb1/2/3 of LHC-II complex 0.04 Archaeplastida
Mp7g05980.1 No alias component LHCb1/2/3 of LHC-II complex 0.05 Archaeplastida
Mp7g06710.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Archaeplastida
Mp7g06730.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
Mp7g06740.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
Mp7g06790.1 No alias component LHCb1/2/3 of LHC-II complex 0.04 Archaeplastida
Mp7g09340.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
Pp3c10_3020V3.1 No alias photosystem II light harvesting complex gene 2.3 0.04 Archaeplastida
Pp3c12_19190V3.1 No alias photosystem I light harvesting complex gene 2 0.02 Archaeplastida
Pp3c22_5610V3.1 No alias photosystem II light harvesting complex gene 2.1 0.07 Archaeplastida
Pp3c2_36190V3.1 No alias photosystem II light harvesting complex gene 2.1 0.06 Archaeplastida
Pp3c2_36480V3.1 No alias photosystem II light harvesting complex gene 2.1 0.02 Archaeplastida
Pp3c2_36500V3.1 No alias photosystem II light harvesting complex gene 2.1 0.06 Archaeplastida
Pp3c2_36570V3.1 No alias photosystem II light harvesting complex gene 2.1 0.05 Archaeplastida
Pp3c5_7150V3.1 No alias photosystem II light harvesting complex gene 2.1 0.04 Archaeplastida
Pp3c5_7180V3.1 No alias photosystem II light harvesting complex gene 2.1 0.02 Archaeplastida
Zm00001e009885_P001 No alias component LHCa6 of LHC-I complex 0.04 Archaeplastida
Zm00001e020625_P001 No alias Chlorophyll a-b binding protein 48, chloroplastic OS=Zea... 0.02 Archaeplastida
Zm00001e026547_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e041918_P001 No alias component LHCb6 of LHC-II complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001897 cytolysis by symbiont of host cells IEP Neighborhood
BP GO:0001906 cell killing IEP Neighborhood
BP GO:0001907 killing by symbiont of host cells IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
BP GO:0019835 cytolysis IEP Neighborhood
BP GO:0019836 hemolysis by symbiont of host erythrocytes IEP Neighborhood
BP GO:0031640 killing of cells of other organism IEP Neighborhood
BP GO:0035821 modification of morphology or physiology of other organism IEP Neighborhood
BP GO:0044003 modification by symbiont of host morphology or physiology IEP Neighborhood
BP GO:0044004 disruption by symbiont of host cell IEP Neighborhood
BP GO:0044179 hemolysis in other organism IEP Neighborhood
BP GO:0044364 disruption of cells of other organism IEP Neighborhood
BP GO:0044419 interspecies interaction between organisms IEP Neighborhood
BP GO:0044764 multi-organism cellular process IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
BP GO:0051701 interaction with host IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051715 cytolysis in other organism IEP Neighborhood
BP GO:0051801 cytolysis in other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0051817 modification of morphology or physiology of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0051818 disruption of cells of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0051883 killing of cells in other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052331 hemolysis in other organism involved in symbiotic interaction IEP Neighborhood
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 64 229
No external refs found!