Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL13 component
Gene families : OG0002028 (Archaeplastida) Phylogenetic Tree(s): OG0002028_tree ,
OG_05_0008000 (LandPlants) Phylogenetic Tree(s): OG_05_0008000_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Smo7665 | |
Cluster | HCCA: Cluster_97 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G78630 | emb1473 | Ribosomal protein L13 family protein | 0.02 | Archaeplastida | |
Cpa|evm.model.tig00020912.24 | No alias | 50S ribosomal protein L13, chloroplastic OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
Cre06.g264350 | No alias | Protein biosynthesis.organelle translation... | 0.05 | Archaeplastida | |
Cre09.g405200 | No alias | Protein biosynthesis.organelle translation... | 0.02 | Archaeplastida | |
GSVIVT01014101001 | No alias | Protein biosynthesis.organelle translation... | 0.04 | Archaeplastida | |
Gb_28095 | No alias | component psRPL13 of large ribosomal subunit proteome | 0.03 | Archaeplastida | |
MA_10433400g0010 | No alias | component psRPL13 of large ribosomal subunit proteome | 0.04 | Archaeplastida | |
Mp3g07030.1 | No alias | component psRPL13 of large ribosomal subunit proteome | 0.07 | Archaeplastida | |
Pp3c1_3220V3.1 | No alias | Ribosomal protein L13 family protein | 0.02 | Archaeplastida | |
Pp3c20_2980V3.1 | No alias | Ribosomal protein L13 family protein | 0.1 | Archaeplastida | |
Solyc07g062190.4.1 | No alias | component psRPL13 of large ribosomal subunit proteome | 0.07 | Archaeplastida | |
Solyc12g014390.3.1 | No alias | component psRPL13 of large ribosomal subunit proteome | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004089 | carbonate dehydratase activity | IEP | Neighborhood |
MF | GO:0005215 | transporter activity | IEP | Neighborhood |
CC | GO:0005575 | cellular_component | IEP | Neighborhood |
CC | GO:0005622 | intracellular | IEP | Neighborhood |
MF | GO:0008324 | cation transmembrane transporter activity | IEP | Neighborhood |
CC | GO:0009512 | cytochrome b6f complex | IEP | Neighborhood |
CC | GO:0009521 | photosystem | IEP | Neighborhood |
CC | GO:0009522 | photosystem I | IEP | Neighborhood |
CC | GO:0009523 | photosystem II | IEP | Neighborhood |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Neighborhood |
BP | GO:0010207 | photosystem II assembly | IEP | Neighborhood |
MF | GO:0015075 | ion transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015077 | monovalent inorganic cation transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015405 | P-P-bond-hydrolysis-driven transmembrane transporter activity | IEP | Neighborhood |
CC | GO:0016020 | membrane | IEP | Neighborhood |
BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
MF | GO:0016730 | oxidoreductase activity, acting on iron-sulfur proteins as donors | IEP | Neighborhood |
MF | GO:0016836 | hydro-lyase activity | IEP | Neighborhood |
MF | GO:0016887 | ATPase activity | IEP | Neighborhood |
MF | GO:0019829 | cation-transporting ATPase activity | IEP | Neighborhood |
MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
BP | GO:0022607 | cellular component assembly | IEP | Neighborhood |
MF | GO:0022804 | active transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0022853 | active ion transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0022857 | transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Neighborhood |
CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Neighborhood |
MF | GO:0042623 | ATPase activity, coupled | IEP | Neighborhood |
MF | GO:0042625 | ATPase coupled ion transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0042626 | ATPase activity, coupled to transmembrane movement of substances | IEP | Neighborhood |
MF | GO:0043492 | ATPase activity, coupled to movement of substances | IEP | Neighborhood |
BP | GO:0043933 | protein-containing complex subunit organization | IEP | Neighborhood |
CC | GO:0044424 | intracellular part | IEP | Neighborhood |
CC | GO:0044425 | membrane part | IEP | Neighborhood |
CC | GO:0044436 | thylakoid part | IEP | Neighborhood |
CC | GO:0044464 | cell part | IEP | Neighborhood |
MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | Neighborhood |
MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | Neighborhood |
BP | GO:0065003 | protein-containing complex assembly | IEP | Neighborhood |
CC | GO:0070069 | cytochrome complex | IEP | Neighborhood |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
CC | GO:0098796 | membrane protein complex | IEP | Neighborhood |
CC | GO:1902494 | catalytic complex | IEP | Neighborhood |
CC | GO:1990204 | oxidoreductase complex | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005822 | Ribosomal_L13 | 4 | 128 |
No external refs found! |