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  5. Smo77000

Smo77000


Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.HD-ZIP III transcription factor


Gene families : OG0000862 (Archaeplastida) Phylogenetic Tree(s): OG0000862_tree ,
OG_05_0106279 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo77000
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00085520 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01021625001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
LOC_Os12g41860.1 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Mp1g24140.1 No alias transcription factor (HD-ZIP III) 0.02 Archaeplastida
Pp3c16_15450V3.1 No alias Homeobox-leucine zipper family protein / lipid-binding... 0.03 Archaeplastida
Smo270954 No alias RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
Solyc02g024070.3.1 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Solyc11g069470.3.1 No alias transcription factor (HD-ZIP III) 0.04 Archaeplastida
Zm00001e000073_P001 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Zm00001e003226_P004 No alias transcription factor (HD-ZIP III) 0.02 Archaeplastida
Zm00001e004553_P004 No alias transcription factor (HD-ZIP III) 0.02 Archaeplastida
Zm00001e018118_P002 No alias transcription factor (HD-ZIP III) 0.06 Archaeplastida
Zm00001e039093_P002 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0017006 protein-tetrapyrrole linkage IEP Neighborhood
BP GO:0017007 protein-bilin linkage IEP Neighborhood
BP GO:0017009 protein-phycocyanobilin linkage IEP Neighborhood
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 163 372
No external refs found!