Smo77081

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.U-Box E3 ligase activities.PUB-type

Gene families : OG0001367 (Archaeplastida) Phylogenetic Tree(s): OG0001367_tree ,
OG_05_0001852 (LandPlants) Phylogenetic Tree(s): OG_05_0001852_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo77081
Cluster	HCCA: Cluster_143

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01000832001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.03	Archaeplastida
GSVIVT01038602001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.02	Archaeplastida
Gb_11374	No alias	E3 ubiquitin ligase (PUB)	0.03	Archaeplastida
Mp1g26780.1	No alias	E3 ubiquitin ligase (PUB)	0.02	Archaeplastida
Solyc01g096200.4.1	No alias	E3 ubiquitin ligase (PUB)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
CC	GO:0030117	membrane coat	IEP	Neighborhood
CC	GO:0030120	vesicle coat	IEP	Neighborhood
CC	GO:0030127	COPII vesicle coat	IEP	Neighborhood
CC	GO:0044433	cytoplasmic vesicle part	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	257	318

External Links

No external refs found!

Smo77081

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation