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  5. Smo77276

Smo77276


Description : ATP-dependent DNA helicase At3g02060, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0004596 (Archaeplastida) Phylogenetic Tree(s): OG0004596_tree ,
OG_05_0006913 (LandPlants) Phylogenetic Tree(s): OG_05_0006913_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo77276
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00242110 evm_27.TU.AmTr_v1... ATP-dependent DNA helicase At3g02060, chloroplastic... 0.02 Archaeplastida
AT3G02060 No alias DEAD/DEAH box helicase, putative 0.04 Archaeplastida
GSVIVT01032955001 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.04 Archaeplastida
LOC_Os11g32880.1 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.05 Archaeplastida
MA_10436969g0010 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.02 Archaeplastida
MA_190693g0010 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.02 Archaeplastida
MA_9353463g0010 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.02 Archaeplastida
Mp2g07230.1 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.04 Archaeplastida
Solyc02g094590.3.1 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.03 Archaeplastida
Zm00001e011170_P004 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0032039 integrator complex IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0032977 membrane insertase activity IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
CC GO:0071203 WASH complex IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR001650 Helicase_C 354 459
No external refs found!