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Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana
Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0106292 (LandPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo77340 | |
| Cluster | HCCA: Cluster_130 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00138570 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | Archaeplastida | |
| AMTR_s00066p00062930 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g49170,... | 0.02 | Archaeplastida | |
| AMTR_s00127p00016340 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g32430,... | 0.02 | Archaeplastida | |
| AMTR_s00439p00011030 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g04780,... | 0.04 | Archaeplastida | |
| Gb_13599 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | Archaeplastida | |
| Gb_33061 | No alias | RNA editing factor (MEF3) | 0.02 | Archaeplastida | |
| Gb_34736 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | Archaeplastida | |
| Gb_36168 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.02 | Archaeplastida | |
| LOC_Os02g49830.1 | No alias | Pentatricopeptide repeat-containing protein At3g22690... | 0.02 | Archaeplastida | |
| LOC_Os10g39460.2 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
| MA_104937g0010 | No alias | Pentatricopeptide repeat-containing protein At2g03880,... | 0.02 | Archaeplastida | |
| MA_52613g0020 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.02 | Archaeplastida | |
| MA_81105g0010 | No alias | RNA editing factor (OTP82) | 0.02 | Archaeplastida | |
| MA_9384g0020 | No alias | Pentatricopeptide repeat-containing protein At3g49170,... | 0.02 | Archaeplastida | |
| Smo107480 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | Archaeplastida | |
| Smo80739 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | Archaeplastida | |
| Solyc12g096680.1.1 | No alias | Pentatricopeptide repeat-containing protein At2g03880,... | 0.02 | Archaeplastida | |
| Zm00001e021453_P001 | No alias | Pentatricopeptide repeat-containing protein At5g06540... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000041 | transition metal ion transport | IEP | Neighborhood |
| MF | GO:0004650 | polygalacturonase activity | IEP | Neighborhood |
| BP | GO:0006811 | ion transport | IEP | Neighborhood |
| BP | GO:0006812 | cation transport | IEP | Neighborhood |
| BP | GO:0006826 | iron ion transport | IEP | Neighborhood |
| BP | GO:0030001 | metal ion transport | IEP | Neighborhood |
| MF | GO:0030599 | pectinesterase activity | IEP | Neighborhood |
| BP | GO:0034755 | iron ion transmembrane transport | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 25 | 53 |
| No external refs found! |