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  5. Smo77659

Smo77659


Description : Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0011968 (LandPlants) Phylogenetic Tree(s): OG_05_0011968_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo77659
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT3G49170 EMB2261 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
Gb_01366 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Gb_04648 No alias RNA editing factor (OTP82) 0.03 Archaeplastida
Gb_04828 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 Archaeplastida
Gb_04886 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 Archaeplastida
Gb_08619 No alias RNA editing factor (MEF19) 0.03 Archaeplastida
Gb_11925 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_12240 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 Archaeplastida
Gb_14403 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Gb_20456 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.03 Archaeplastida
Gb_23798 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 Archaeplastida
Gb_23934 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 Archaeplastida
Gb_26155 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.03 Archaeplastida
Gb_26158 No alias RNA editing factor (OTP82) 0.04 Archaeplastida
Gb_29768 No alias Pentatricopeptide repeat-containing protein At1g19720... 0.03 Archaeplastida
Gb_34299 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_35396 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.04 Archaeplastida
Gb_36636 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 Archaeplastida
Gb_38249 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_40680 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 Archaeplastida
MA_482767g0010 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004556 alpha-amylase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 325 372
No external refs found!