1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00019p00236380

AMTR_s00019p00236380 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.331

Description : Pentatricopeptide repeat-containing protein At3g61360 OS=Arabidopsis thaliana


Gene families : OG0006800 (Archaeplastida) Phylogenetic Tree(s): OG0006800_tree ,
OG_05_0005102 (LandPlants) Phylogenetic Tree(s): OG_05_0005102_tree ,
OG_06_0007598 (SeedPlants) Phylogenetic Tree(s): OG_06_0007598_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00236380
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AT3G61360 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 231 278
IPR002885 Pentatricopeptide_repeat 301 347
IPR002885 Pentatricopeptide_repeat 164 208
IPR002885 Pentatricopeptide_repeat 415 438
No external refs found!