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  5. Smo78092

Smo78092


Description : Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000000 (LandPlants) Phylogenetic Tree(s): OG_05_0000000_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo78092
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT5G50390 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Archaeplastida
GSVIVT01015461001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
LOC_Os07g31000.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Smo102603 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.02 Archaeplastida
Smo97289 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
Smo99647 No alias Pentatricopeptide repeat-containing protein At5g27110... 0.04 Archaeplastida
Zm00001e006544_P001 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 287 307
No external refs found!