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  5. Smo78404

Smo78404


Description : Laccase-12 OS=Arabidopsis thaliana


Gene families : OG0000114 (Archaeplastida) Phylogenetic Tree(s): OG0000114_tree ,
OG_05_0000045 (LandPlants) Phylogenetic Tree(s): OG_05_0000045_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo78404
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00245710 evm_27.TU.AmTr_v1... Cell wall.lignin.monolignol conjugation and... 0.02 Archaeplastida
AMTR_s00029p00185120 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.01 Archaeplastida
GSVIVT01001604001 No alias Laccase-14 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01001614001 No alias Laccase-14 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_14614 No alias Laccase-4 OS=Oryza sativa subsp. japonica... 0.07 Archaeplastida
Gb_34469 No alias Laccase-12 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_186173g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_21316g0010 No alias Laccase-5 OS=Arabidopsis thaliana (sp|q9siy8|lac5_arath... 0.01 Archaeplastida
MA_33288g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.01 Archaeplastida
MA_57140g0020 No alias Laccase-12 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Smo230356 No alias Laccase-4 OS=Oryza sativa subsp. japonica 0.06 Archaeplastida
Solyc06g082240.2.1 No alias Laccase-3 OS=Arabidopsis thaliana (sp|q56yt0|lac3_arath... 0.02 Archaeplastida
Zm00001e019412_P001 No alias Laccase-3 OS=Oryza sativa subsp. japonica... 0.01 Archaeplastida
Zm00001e028830_P002 No alias Laccase-3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
InterPro domains Description Start Stop
IPR011706 Cu-oxidase_2 435 565
No external refs found!