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  5. Smo78412

Smo78412


Description : Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza sativa subsp. japonica


Gene families : OG0001478 (Archaeplastida) Phylogenetic Tree(s): OG0001478_tree ,
OG_05_0001122 (LandPlants) Phylogenetic Tree(s): OG_05_0001122_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo78412
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AT5G18650 No alias CHY-type/CTCHY-type/RING-type Zinc finger protein 0.04 Archaeplastida
AT5G22920 No alias CHY-type/CTCHY-type/RING-type Zinc finger protein 0.03 Archaeplastida
GSVIVT01031467001 No alias E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana 0.02 Archaeplastida
MA_10429565g0010 No alias Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza... 0.02 Archaeplastida
MA_126866g0010 No alias Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004555 alpha,alpha-trehalase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0015927 trehalase activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
InterPro domains Description Start Stop
IPR008913 Znf_CHY 5 86
No external refs found!