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  4. Sequence
  5. Smo78691

Smo78691


No description available


Gene families : OG0006337 (Archaeplastida) Phylogenetic Tree(s): OG0006337_tree ,
OG_05_0007786 (LandPlants) Phylogenetic Tree(s): OG_05_0007786_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo78691
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AT4G04940 No alias transducin family protein / WD-40 repeat family protein 0.05 Archaeplastida
Cpa|evm.model.tig00021348.51 No alias No description available 0.02 Archaeplastida
Cre10.g466250 No alias No description available 0.03 Archaeplastida
LOC_Os06g43690.1 No alias SSU processome assembly factor (UTP21) 0.06 Archaeplastida
MA_42826g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp3g13780.1 No alias SSU processome assembly factor (UTP21) 0.05 Archaeplastida
Pp3c7_4500V3.1 No alias transducin family protein / WD-40 repeat family protein 0.04 Archaeplastida
Solyc01g087670.3.1 No alias SSU processome assembly factor (UTP21) 0.03 Archaeplastida
Zm00001e037473_P002 No alias SSU processome assembly factor (UTP21) 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
MF GO:0004017 adenylate kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007051 spindle organization IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
MF GO:0050145 nucleoside monophosphate kinase activity IEP Neighborhood
BP GO:0051225 spindle assembly IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR007319 SSU_processome_Utp21 683 896
No external refs found!