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  5. AMTR_s00019p00239960

AMTR_s00019p00239960 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.349

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000125 (Archaeplastida) Phylogenetic Tree(s): OG0000125_tree ,
OG_05_0000151 (LandPlants) Phylogenetic Tree(s): OG_05_0000151_tree ,
OG_06_0000175 (SeedPlants) Phylogenetic Tree(s): OG_06_0000175_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00239960
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00189960 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01008838001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01009466001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01035519001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01036994001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
LOC_Os01g06590.2 No alias Probable E3 ubiquitin-protein ligase RHG1A... 0.04 Archaeplastida
LOC_Os06g03580.2 No alias E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_8313423g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c19_21510V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c22_1990V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Solyc01g107930.3.1 No alias E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e024685_P001 No alias E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e028107_P001 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.02 Archaeplastida
Zm00001e029867_P003 No alias E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e040092_P001 No alias E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e040588_P001 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004325 ferrochelatase activity IEP Neighborhood
MF GO:0004779 sulfate adenylyltransferase activity IEP Neighborhood
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006783 heme biosynthetic process IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016833 oxo-acid-lyase activity IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019211 phosphatase activator activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0042168 heme metabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 504 547
No external refs found!