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  5. Smo79331

Smo79331


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL35 component


Gene families : OG0002158 (Archaeplastida) Phylogenetic Tree(s): OG0002158_tree ,
OG_05_0106353 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo79331
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00034p00044200 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
AMTR_s00040p00225520 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
AT2G39390 No alias Ribosomal L29 family protein 0.21 Archaeplastida
AT3G09500 No alias Ribosomal L29 family protein 0.29 Archaeplastida
AT3G55170 No alias Ribosomal L29 family protein 0.12 Archaeplastida
AT5G02610 No alias Ribosomal L29 family protein 0.21 Archaeplastida
Cpa|evm.model.tig00000241.79 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
Cre14.g617900 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.22 Archaeplastida
GSVIVT01005972001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.22 Archaeplastida
GSVIVT01025050001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.16 Archaeplastida
Gb_12918 No alias component RPL35 of LSU proteome component 0.02 Archaeplastida
LOC_Os02g30050.1 No alias component RPL35 of LSU proteome component 0.05 Archaeplastida
MA_10429159g0020 No alias component RPL35 of LSU proteome component 0.09 Archaeplastida
MA_37003g0010 No alias component RPL35 of LSU proteome component 0.06 Archaeplastida
MA_92240g0010 No alias component RPL35 of LSU proteome component 0.05 Archaeplastida
Mp3g07170.1 No alias component RPL35 of LSU proteome component 0.03 Archaeplastida
Mp6g05620.1 No alias component RPL35 of LSU proteome component 0.23 Archaeplastida
Pp3c13_5200V3.1 No alias Ribosomal L29 family protein 0.25 Archaeplastida
Pp3c26_13720V3.1 No alias Ribosomal L29 family protein 0.08 Archaeplastida
Pp3c3_2800V3.1 No alias Ribosomal L29 family protein 0.18 Archaeplastida
Pp3c4_30730V3.1 No alias Ribosomal L29 family protein 0.22 Archaeplastida
Solyc04g010240.3.1 No alias component RPL35 of LSU proteome component 0.2 Archaeplastida
Solyc06g075620.3.1 No alias component RPL35 of LSU proteome component 0.08 Archaeplastida
Zm00001e008428_P002 No alias component RPL35 of LSU proteome component 0.11 Archaeplastida
Zm00001e014607_P001 No alias component RPL35 of LSU proteome component 0.14 Archaeplastida
Zm00001e040695_P003 No alias component RPL35 of LSU proteome component 0.11 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 6 61
No external refs found!