Smo79973

Description : Protein biosynthesis.organelle translation machineries.translation initiation.IF-1 initiation factor

Gene families : OG0008130 (Archaeplastida) Phylogenetic Tree(s): OG0008130_tree ,
OG_05_0009850 (LandPlants) Phylogenetic Tree(s): OG_05_0009850_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo79973
Cluster	HCCA: Cluster_206

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT4G11175	No alias	Nucleic acid-binding, OB-fold-like protein	0.04	Archaeplastida
Cre04.g218700	No alias	Protein biosynthesis.organelle translation...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	Neighborhood
MF	GO:0005198	structural molecule activity	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
CC	GO:0005622	intracellular	IEP	Neighborhood
CC	GO:0009521	photosystem	IEP	Neighborhood
CC	GO:0009522	photosystem I	IEP	Neighborhood
CC	GO:0009523	photosystem II	IEP	Neighborhood
MF	GO:0019843	rRNA binding	IEP	Neighborhood
CC	GO:0032991	protein-containing complex	IEP	Neighborhood
CC	GO:0044424	intracellular part	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
CC	GO:0044436	thylakoid part	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
CC	GO:0098796	membrane protein complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006196	RNA-binding_domain_S1_IF1	6	69

External Links

No external refs found!