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  5. AMTR_s00019p00244260

AMTR_s00019p00244260 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.367

Description : AAA-ATPase At3g50940 OS=Arabidopsis thaliana


Gene families : OG0000095 (Archaeplastida) Phylogenetic Tree(s): OG0000095_tree ,
OG_05_0000059 (LandPlants) Phylogenetic Tree(s): OG_05_0000059_tree ,
OG_06_0012819 (SeedPlants) Phylogenetic Tree(s): OG_06_0012819_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00244260
Cluster HCCA: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
AT1G43910 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025753 AAA_N_dom 33 130
IPR003959 ATPase_AAA_core 237 396
No external refs found!