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  5. AMTR_s00019p00244450

AMTR_s00019p00244450 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.368

Description : AAA-ATPase At3g28510 OS=Arabidopsis thaliana


Gene families : OG0000095 (Archaeplastida) Phylogenetic Tree(s): OG0000095_tree ,
OG_05_0000059 (LandPlants) Phylogenetic Tree(s): OG_05_0000059_tree ,
OG_06_0000488 (SeedPlants) Phylogenetic Tree(s): OG_06_0000488_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00244450
Cluster HCCA: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00111720 evm_27.TU.AmTr_v1... AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00014p00241930 evm_27.TU.AmTr_v1... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00019p00244830 evm_27.TU.AmTr_v1... AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT2G18193 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
AT3G50930 BCS1 cytochrome BC1 synthesis 0.05 Archaeplastida
AT4G25835 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
AT4G30250 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
AT5G17730 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
AT5G40010 AATP1 AAA-ATPase 1 0.03 Archaeplastida
GSVIVT01008088001 No alias AAA-ATPase At3g28540 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01010371001 No alias AAA-ATPase At5g17760 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01023336001 No alias AAA-ATPase At3g28600 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01029202001 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01032552001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_27547 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g40140.1 No alias AAA-ATPase At3g50940 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os03g02330.1 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g58800.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os07g09470.1 No alias AAA-ATPase At3g28610 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os12g28137.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os12g28177.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os12g28550.1 No alias AAA-ATPase At5g40000 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os12g44190.1 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10111030g0010 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10285593g0010 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10435468g0010 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_10436428g0010 No alias AAA-ATPase At3g28610 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_161279g0020 No alias AAA-ATPase At3g28610 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_178867g0010 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_344969g0010 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_354707g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_56516g0010 No alias AAA-ATPase At3g28570, mitochondrial OS=Arabidopsis... 0.06 Archaeplastida
MA_5780742g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_69227g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_72725g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c12_21960V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Archaeplastida
Pp3c1_35560V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.05 Archaeplastida
Pp3c8_710V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
Smo75451 No alias AAA-ATPase At3g28600 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc01g096230.4.1 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc03g033790.4.1 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.03 Archaeplastida
Solyc03g082640.3.1 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc04g080680.4.1 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.02 Archaeplastida
Solyc12g055810.1.1 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e003357_P001 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e003358_P001 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e004348_P001 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e012527_P001 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e013139_P001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e027961_P001 No alias AAA-ATPase At3g50940 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006541 glutamine metabolic process IEP Neighborhood
BP GO:0006542 glutamine biosynthetic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016833 oxo-acid-lyase activity IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025753 AAA_N_dom 5 101
IPR003959 ATPase_AAA_core 214 360
No external refs found!