Smo80869

Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.BEL transcription factor

Gene families : OG0000236 (Archaeplastida) Phylogenetic Tree(s): OG0000236_tree ,
OG_05_0000141 (LandPlants) Phylogenetic Tree(s): OG_05_0000141_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo80869
Cluster	HCCA: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00059p00164750	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.02	Archaeplastida
AMTR_s00165p00052010	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
AT2G23760	BLH4, SAW2	BEL1-like homeodomain 4	0.03	Archaeplastida
AT2G27220	BLH5	BEL1-like homeodomain 5	0.02	Archaeplastida
AT2G27990	BLH8, PNF	BEL1-like homeodomain 8	0.02	Archaeplastida
AT2G35940	EDA29, BLH1	BEL1-like homeodomain 1	0.03	Archaeplastida
AT4G34610	BLH6	BEL1-like homeodomain 6	0.02	Archaeplastida
AT5G02030	VAN, BLH9, RPL,...	POX (plant homeobox) family protein	0.03	Archaeplastida
Cpa\|evm.model.tig00020927.63	No alias	RNA biosynthesis.transcriptional activation.HB...	0.01	Archaeplastida
GSVIVT01035361001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
Gb_23074	No alias	transcription factor (BEL)	0.03	Archaeplastida
Gb_28278	No alias	transcription factor (BEL)	0.02	Archaeplastida
LOC_Os02g13310.1	No alias	transcription factor (BEL)	0.02	Archaeplastida
LOC_Os12g43950.1	No alias	transcription factor (BEL)	0.02	Archaeplastida
MA_76835g0010	No alias	transcription factor (BEL)	0.02	Archaeplastida
Mp5g11060.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Pp3c9_6780V3.1	No alias	BEL1-like homeodomain 7	0.02	Archaeplastida
Solyc02g065490.4.1	No alias	transcription factor (BEL)	0.05	Archaeplastida
Solyc04g079830.2.1	No alias	transcription factor (BEL)	0.03	Archaeplastida
Solyc04g080780.2.1	No alias	transcription factor (BEL)	0.02	Archaeplastida
Solyc04g080790.3.1	No alias	transcription factor (BEL)	0.04	Archaeplastida
Zm00001e000495_P001	No alias	transcription factor (BEL)	0.02	Archaeplastida
Zm00001e003327_P001	No alias	transcription factor (BEL)	0.02	Archaeplastida
Zm00001e014436_P001	No alias	transcription factor (BEL)	0.02	Archaeplastida
Zm00001e029812_P001	No alias	transcription factor (BEL)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
MF	GO:0005216	ion channel activity	IEP	Neighborhood
BP	GO:0009767	photosynthetic electron transport chain	IEP	Neighborhood
MF	GO:0015267	channel activity	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0022803	passive transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022838	substrate-specific channel activity	IEP	Neighborhood
BP	GO:0022900	electron transport chain	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR008422	Homeobox_KN_domain	257	293

External Links

No external refs found!

Smo80869

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation