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  5. AT1G34575

AT1G34575


Description : FAD-binding Berberine family protein


Gene families : OG0000172 (Archaeplastida) Phylogenetic Tree(s): OG0000172_tree ,
OG_05_0000076 (LandPlants) Phylogenetic Tree(s): OG_05_0000076_tree ,
OG_06_0000069 (SeedPlants) Phylogenetic Tree(s): OG_06_0000069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G34575
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00163940 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
AT4G20800 No alias FAD-binding Berberine family protein 0.09 Archaeplastida
GSVIVT01021629001 No alias Berberine bridge enzyme-like 8 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01021720001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Gb_03609 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Gb_21186 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Gb_21188 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Gb_24403 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Gb_24416 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
LOC_Os02g14090.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
LOC_Os06g35590.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
MA_260168g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 Archaeplastida
MA_26891g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
MA_8334627g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Solyc02g022860.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Solyc02g069690.1.1 No alias Berberine bridge enzyme-like 15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc02g070070.1.1 No alias Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc02g070150.1.1 No alias Berberine bridge enzyme-like 28 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc02g079440.3.1 No alias Berberine bridge enzyme-like 22 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc09g072660.4.1 No alias Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e021429_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Zm00001e021718_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e030684_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Zm00001e035611_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Zm00001e035614_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
Zm00001e037259_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Zm00001e042367_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
Zm00001e042369_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity ISS Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP Neighborhood
MF GO:0004126 cytidine deaminase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004565 beta-galactosidase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005199 structural constituent of cell wall IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006071 glycerol metabolic process IEP Neighborhood
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Neighborhood
BP GO:0006216 cytidine catabolic process IEP Neighborhood
BP GO:0006863 purine nucleobase transport IEP Neighborhood
BP GO:0006885 regulation of pH IEP Neighborhood
BP GO:0007035 vacuolar acidification IEP Neighborhood
MF GO:0008889 glycerophosphodiester phosphodiesterase activity IEP Neighborhood
BP GO:0009164 nucleoside catabolic process IEP Neighborhood
BP GO:0009699 phenylpropanoid biosynthetic process IEP Neighborhood
BP GO:0009972 cytidine deamination IEP Neighborhood
BP GO:0010023 proanthocyanidin biosynthetic process IEP Neighborhood
BP GO:0010231 maintenance of seed dormancy IEP Neighborhood
BP GO:0015851 nucleobase transport IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Neighborhood
MF GO:0019239 deaminase activity IEP Neighborhood
BP GO:0019400 alditol metabolic process IEP Neighborhood
BP GO:0030004 cellular monovalent inorganic cation homeostasis IEP Neighborhood
BP GO:0030641 regulation of cellular pH IEP Neighborhood
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Neighborhood
BP GO:0042454 ribonucleoside catabolic process IEP Neighborhood
MF GO:0043424 protein histidine kinase binding IEP Neighborhood
BP GO:0045851 pH reduction IEP Neighborhood
BP GO:0046087 cytidine metabolic process IEP Neighborhood
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Neighborhood
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Neighborhood
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Neighborhood
BP GO:0048444 floral organ morphogenesis IEP Neighborhood
BP GO:0048445 carpel morphogenesis IEP Neighborhood
BP GO:0051452 intracellular pH reduction IEP Neighborhood
BP GO:0051453 regulation of intracellular pH IEP Neighborhood
BP GO:0055067 monovalent inorganic cation homeostasis IEP Neighborhood
BP GO:0060688 regulation of morphogenesis of a branching structure IEP Neighborhood
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Neighborhood
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Neighborhood
BP GO:0097437 maintenance of dormancy IEP Neighborhood
BP GO:1900618 regulation of shoot system morphogenesis IEP Neighborhood
BP GO:1905428 regulation of plant organ formation IEP Neighborhood
BP GO:2000032 regulation of secondary shoot formation IEP Neighborhood
InterPro domains Description Start Stop
IPR012951 BBE 467 522
IPR006094 Oxid_FAD_bind_N 79 215
No external refs found!