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  5. Smo81392

Smo81392


Description : RNA processing.organelle machineries.RNA editing.ORRM-type RNA editing factor


Gene families : OG0000043 (Archaeplastida) Phylogenetic Tree(s): OG0000043_tree ,
OG_05_0000394 (LandPlants) Phylogenetic Tree(s): OG_05_0000394_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo81392
Cluster HCCA: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
AT5G50250 CP31B chloroplast RNA-binding protein 31B 0.03 Archaeplastida
GSVIVT01017884001 No alias No description available 0.03 Archaeplastida
LOC_Os01g74340.1 No alias Glycine-rich RNA-binding protein 2, mitochondrial... 0.03 Archaeplastida
LOC_Os03g47800.1 No alias RNA chaperone (RZ1|GR-RBP) 0.04 Archaeplastida
LOC_Os12g31800.1 No alias RNA editing factor (ORRM) 0.03 Archaeplastida
Solyc10g047130.2.1 No alias RNA chaperone (RZ1|GR-RBP) 0.02 Archaeplastida
Zm00001e005260_P002 No alias RNA chaperone (RZ1|GR-RBP) 0.02 Archaeplastida
Zm00001e010844_P001 No alias 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana... 0.02 Archaeplastida
Zm00001e011440_P001 No alias RNA chaperone (RZ1|GR-RBP) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 39 109
No external refs found!