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  5. Smo81544

Smo81544


Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.extensins (EXTs).glycoproteins.LRR-domain extensin


Gene families : OG0000279 (Archaeplastida) Phylogenetic Tree(s): OG0000279_tree ,
OG_05_0000206 (LandPlants) Phylogenetic Tree(s): OG_05_0000206_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo81544
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271610 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
AMTR_s00025p00231840 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 2... 0.03 Archaeplastida
AMTR_s00051p00142580 evm_27.TU.AmTr_v1... Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.04 Archaeplastida
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.02 Archaeplastida
AT1G62440 LRX2 leucine-rich repeat/extensin 2 0.03 Archaeplastida
AT2G19780 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
AT3G19320 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
AT3G22800 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
AT4G06744 No alias Leucine-rich repeat (LRR) family protein 0.05 Archaeplastida
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
AT4G28380 No alias Leucine-rich repeat (LRR) family protein 0.05 Archaeplastida
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT4G33970 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
GSVIVT01009442001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01018025001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
GSVIVT01020574001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
GSVIVT01031702001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
Gb_10910 No alias LRR-domain extensin 0.03 Archaeplastida
Gb_26318 No alias LRR-domain extensin 0.03 Archaeplastida
LOC_Os01g25460.1 No alias LRR-domain extensin 0.03 Archaeplastida
LOC_Os01g41120.1 No alias LRR-domain extensin 0.07 Archaeplastida
LOC_Os02g04540.1 No alias LRR-domain extensin 0.05 Archaeplastida
LOC_Os02g40260.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os03g43650.1 No alias LRR-domain extensin 0.08 Archaeplastida
LOC_Os03g58110.1 No alias LRR-domain extensin 0.06 Archaeplastida
LOC_Os04g42620.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os05g08770.2 No alias LRR-domain extensin 0.02 Archaeplastida
LOC_Os05g09640.1 No alias Leucine-rich repeat extensin-like protein 4... 0.05 Archaeplastida
LOC_Os07g07990.1 No alias LRR-domain extensin 0.02 Archaeplastida
LOC_Os12g35710.1 No alias LRR-domain extensin 0.02 Archaeplastida
MA_3066179g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp8g04500.1 No alias Leucine-rich repeat extensin-like protein 1... 0.03 Archaeplastida
Pp3c12_22970V3.1 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
Pp3c1_10970V3.1 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
Pp3c4_3520V3.1 No alias Leucine-rich repeat (LRR) family protein 0.05 Archaeplastida
Pp3c8_3600V3.1 No alias leucine-rich repeat/extensin 1 0.02 Archaeplastida
Solyc01g107790.2.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 Archaeplastida
Solyc02g064940.1.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 Archaeplastida
Solyc07g053840.1.1 No alias LRR-domain extensin 0.08 Archaeplastida
Solyc09g082530.3.1 No alias LRR-domain extensin 0.02 Archaeplastida
Solyc10g050110.1.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.09 Archaeplastida
Zm00001e005974_P001 No alias LRR-domain extensin 0.07 Archaeplastida
Zm00001e011874_P001 No alias LRR-domain extensin 0.07 Archaeplastida
Zm00001e015109_P001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e017627_P001 No alias Pollen-specific leucine-rich repeat extensin-like... 0.03 Archaeplastida
Zm00001e022985_P003 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.01 Archaeplastida
Zm00001e026840_P001 No alias LRR-domain extensin 0.04 Archaeplastida
Zm00001e031217_P001 No alias Leucine-rich repeat extensin-like protein 4... 0.02 Archaeplastida
Zm00001e031241_P001 No alias LRR-domain extensin 0.04 Archaeplastida
Zm00001e041184_P001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e041899_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Neighborhood
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 213 271
No external refs found!