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  5. Smo84280

Smo84280


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0000498 (LandPlants) Phylogenetic Tree(s): OG_05_0000498_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo84280
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00022290 evm_27.TU.AmTr_v1... Transcription factor SRM1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G19000 No alias Homeodomain-like superfamily protein 0.05 Archaeplastida
AT5G05790 No alias Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
AT5G58900 No alias Homeodomain-like transcriptional regulator 0.03 Archaeplastida
GSVIVT01005816001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01016996001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035363001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_05002 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Gb_15334 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Gb_28483 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os01g09640.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
LOC_Os01g63460.1 No alias transcription factor (MYB-related) 0.05 Archaeplastida
MA_10433265g0010 No alias transcription factor (MYB-related) 0.04 Archaeplastida
MA_9437011g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Pp3c15_23110V3.1 No alias myb-like transcription factor family protein 0.03 Archaeplastida
Solyc04g005100.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc07g026680.2.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Solyc08g078340.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc09g007570.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc12g044610.2.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e031738_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004089 carbonate dehydratase activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 115 159
No external refs found!