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Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.435
Description : COP1-interactive protein 1 OS=Arabidopsis thaliana
Gene families : OG0002800 (Archaeplastida) Phylogenetic Tree(s): OG0002800_tree ,
OG_05_0001972 (LandPlants) Phylogenetic Tree(s): OG_05_0001972_tree ,
OG_06_0001718 (SeedPlants) Phylogenetic Tree(s): OG_06_0001718_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00019p00254550 | |
| Cluster | HCCA: Cluster_172 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G24460 | No alias | unknown protein; FUNCTIONS IN: molecular_function... | 0.1 | Archaeplastida | |
| AT4G31570 | No alias | CONTAINS InterPro DOMAIN/s: Prefoldin... | 0.08 | Archaeplastida | |
| GSVIVT01010295001 | No alias | Vesicle trafficking.SNARE target membrane recognition... | 0.06 | Archaeplastida | |
| GSVIVT01033178001 | No alias | COP1-interactive protein 1 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
| GSVIVT01033179001 | No alias | COP1-interactive protein 1 OS=Arabidopsis thaliana | 0.1 | Archaeplastida | |
| Gb_07542 | No alias | COP1-interactive protein 1 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
| Gb_40009 | No alias | TNO1 vesicle trafficking tethering factor | 0.05 | Archaeplastida | |
| LOC_Os02g05490.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| LOC_Os02g38480.1 | No alias | TNO1 vesicle trafficking tethering factor | 0.03 | Archaeplastida | |
| MA_10430492g0030 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_10431592g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| MA_14490g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Mp4g21920.1 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
| Pp3c4_12010V3.1 | No alias | No annotation | 0.03 | Archaeplastida | |
| Solyc05g014200.3.1 | No alias | TNO1 vesicle trafficking tethering factor | 0.04 | Archaeplastida | |
| Solyc08g006420.3.1 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
| Zm00001e013662_P003 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
| Zm00001e015026_P001 | No alias | TNO1 vesicle trafficking tethering factor | 0.06 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| CC | GO:0000228 | nuclear chromosome | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003712 | transcription coregulator activity | IEP | Neighborhood |
| MF | GO:0003725 | double-stranded RNA binding | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Neighborhood |
| MF | GO:0004386 | helicase activity | IEP | Neighborhood |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | Neighborhood |
| MF | GO:0005215 | transporter activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| CC | GO:0005643 | nuclear pore | IEP | Neighborhood |
| CC | GO:0005694 | chromosome | IEP | Neighborhood |
| BP | GO:0006886 | intracellular protein transport | IEP | Neighborhood |
| MF | GO:0008026 | ATP-dependent helicase activity | IEP | Neighborhood |
| BP | GO:0008104 | protein localization | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| MF | GO:0008381 | mechanosensitive ion channel activity | IEP | Neighborhood |
| MF | GO:0008565 | protein transporter activity | IEP | Neighborhood |
| BP | GO:0009314 | response to radiation | IEP | Neighborhood |
| BP | GO:0009416 | response to light stimulus | IEP | Neighborhood |
| BP | GO:0009581 | detection of external stimulus | IEP | Neighborhood |
| BP | GO:0009582 | detection of abiotic stimulus | IEP | Neighborhood |
| BP | GO:0009583 | detection of light stimulus | IEP | Neighborhood |
| BP | GO:0009584 | detection of visible light | IEP | Neighborhood |
| BP | GO:0009605 | response to external stimulus | IEP | Neighborhood |
| BP | GO:0009628 | response to abiotic stimulus | IEP | Neighborhood |
| BP | GO:0015031 | protein transport | IEP | Neighborhood |
| BP | GO:0015833 | peptide transport | IEP | Neighborhood |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Neighborhood |
| CC | GO:0016459 | myosin complex | IEP | Neighborhood |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
| MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
| MF | GO:0016887 | ATPase activity | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
| BP | GO:0018298 | protein-chromophore linkage | IEP | Neighborhood |
| MF | GO:0022836 | gated channel activity | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0033036 | macromolecule localization | IEP | Neighborhood |
| MF | GO:0034061 | DNA polymerase activity | IEP | Neighborhood |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0042623 | ATPase activity, coupled | IEP | Neighborhood |
| BP | GO:0042886 | amide transport | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| CC | GO:0044422 | organelle part | IEP | Neighborhood |
| CC | GO:0044428 | nuclear part | IEP | Neighborhood |
| CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
| BP | GO:0045184 | establishment of protein localization | IEP | Neighborhood |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | Neighborhood |
| BP | GO:0046907 | intracellular transport | IEP | Neighborhood |
| BP | GO:0051606 | detection of stimulus | IEP | Neighborhood |
| BP | GO:0051641 | cellular localization | IEP | Neighborhood |
| BP | GO:0051649 | establishment of localization in cell | IEP | Neighborhood |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Neighborhood |
| MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Neighborhood |
| BP | GO:0071702 | organic substance transport | IEP | Neighborhood |
| BP | GO:0071705 | nitrogen compound transport | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |