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  5. Smo85520

Smo85520


Description : Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb28 protein


Gene families : OG0006734 (Archaeplastida) Phylogenetic Tree(s): OG0006734_tree ,
OG_05_0007234 (LandPlants) Phylogenetic Tree(s): OG_05_0007234_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo85520
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00160690 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
AT4G28660 PSB28 photosystem II reaction center PSB28 protein 0.03 Archaeplastida
Cre10.g440450 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
GSVIVT01028434001 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
Gb_39548 No alias Psb28 protein involved in PS-II assembly 0.03 Archaeplastida
LOC_Os01g71190.1 No alias Psb28 protein involved in PS-II assembly 0.03 Archaeplastida
Mp2g14630.1 No alias Psb28 protein involved in PS-II assembly 0.07 Archaeplastida
Solyc09g064500.3.1 No alias Psb28 protein involved in PS-II assembly 0.06 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
MF GO:0098809 nitrite reductase activity IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR005610 PSII_Psb28_class-1 6 111
No external refs found!