Description : RNA biosynthesis.transcriptional activation.TUB transcription factor
Gene families : OG0000335 (Archaeplastida) Phylogenetic Tree(s): OG0000335_tree ,
OG_05_0000295 (LandPlants) Phylogenetic Tree(s): OG_05_0000295_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Smo85745 | |
Cluster | HCCA: Cluster_179 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G53320 | AtTLP7, TLP7 | tubby like protein 7 | 0.04 | Archaeplastida | |
AT3G06380 | TLP9, ATTLP9 | tubby-like protein 9 | 0.04 | Archaeplastida | |
GSVIVT01014191001 | No alias | RNA biosynthesis.transcriptional activation.TUB... | 0.03 | Archaeplastida | |
GSVIVT01029701001 | No alias | RNA biosynthesis.transcriptional activation.TUB... | 0.03 | Archaeplastida | |
Gb_38151 | No alias | transcription factor (TUB) | 0.02 | Archaeplastida | |
LOC_Os01g64700.2 | No alias | transcription factor (TUB) | 0.02 | Archaeplastida | |
LOC_Os02g47640.1 | No alias | transcription factor (TUB) | 0.02 | Archaeplastida | |
LOC_Os05g48670.1 | No alias | transcription factor (TUB) | 0.03 | Archaeplastida | |
LOC_Os12g06630.2 | No alias | transcription factor (TUB) | 0.03 | Archaeplastida | |
MA_18086g0010 | No alias | transcription factor (TUB) | 0.02 | Archaeplastida | |
Pp3c20_2190V3.1 | No alias | tubby like protein 3 | 0.02 | Archaeplastida | |
Solyc01g067680.3.1 | No alias | transcription factor (TUB) | 0.02 | Archaeplastida | |
Solyc02g085130.4.1 | No alias | transcription factor (TUB) | 0.03 | Archaeplastida | |
Solyc10g046970.2.1 | No alias | transcription factor (TUB) | 0.04 | Archaeplastida | |
Zm00001e001672_P001 | No alias | transcription factor (TUB) | 0.03 | Archaeplastida | |
Zm00001e023326_P001 | No alias | transcription factor (TUB) | 0.02 | Archaeplastida | |
Zm00001e024284_P002 | No alias | transcription factor (TUB) | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | Neighborhood |
MF | GO:0004650 | polygalacturonase activity | IEP | Neighborhood |
MF | GO:0005216 | ion channel activity | IEP | Neighborhood |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Neighborhood |
BP | GO:0006629 | lipid metabolic process | IEP | Neighborhood |
BP | GO:0008152 | metabolic process | IEP | Neighborhood |
MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | Neighborhood |
MF | GO:0008455 | alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity | IEP | Neighborhood |
MF | GO:0008964 | phosphoenolpyruvate carboxylase activity | IEP | Neighborhood |
MF | GO:0015267 | channel activity | IEP | Neighborhood |
MF | GO:0016740 | transferase activity | IEP | Neighborhood |
MF | GO:0016746 | transferase activity, transferring acyl groups | IEP | Neighborhood |
MF | GO:0016747 | transferase activity, transferring acyl groups other than amino-acyl groups | IEP | Neighborhood |
MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Neighborhood |
MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Neighborhood |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | Neighborhood |
MF | GO:0016831 | carboxy-lyase activity | IEP | Neighborhood |
BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Neighborhood |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0022838 | substrate-specific channel activity | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Neighborhood |
BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Neighborhood |
BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Neighborhood |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001810 | F-box_dom | 63 | 115 |
No external refs found! |