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Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.457
Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor
Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000288 (LandPlants) Phylogenetic Tree(s): OG_05_0000288_tree ,
OG_06_0003085 (SeedPlants) Phylogenetic Tree(s): OG_06_0003085_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00019p00256850 | |
| Cluster | HCCA: Cluster_128 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G08500 | AtMYB83, MYB83 | myb domain protein 83 | 0.02 | Archaeplastida | |
| AT5G58850 | ATMYB119, MYB119 | myb domain protein 119 | 0.02 | Archaeplastida | |
| Cpa|evm.model.tig00020780.48 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | Archaeplastida | |
| GSVIVT01004317001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | Archaeplastida | |
| GSVIVT01008402001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | Archaeplastida | |
| GSVIVT01018577001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | Archaeplastida | |
| GSVIVT01025269001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | Archaeplastida | |
| GSVIVT01032088001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | Archaeplastida | |
| LOC_Os12g33070.1 | No alias | transcription factor (MYB) | 0.03 | Archaeplastida | |
| MA_257850g0010 | No alias | transcription factor (MYB) | 0.03 | Archaeplastida | |
| MA_7032764g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Mp1g08640.1 | No alias | transcription factor (MYB) | 0.02 | Archaeplastida | |
| Pp3c10_10240V3.1 | No alias | Homeodomain-like protein | 0.02 | Archaeplastida | |
| Pp3c24_11770V3.1 | No alias | No annotation | 0.02 | Archaeplastida | |
| Solyc08g068320.3.1 | No alias | transcription factor (MYB) | 0.02 | Archaeplastida | |
| Solyc10g005240.3.1 | No alias | transcription factor (MYB) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000075 | cell cycle checkpoint | IEP | Neighborhood |
| BP | GO:0000077 | DNA damage checkpoint | IEP | Neighborhood |
| MF | GO:0003690 | double-stranded DNA binding | IEP | Neighborhood |
| MF | GO:0003774 | motor activity | IEP | Neighborhood |
| MF | GO:0003777 | microtubule motor activity | IEP | Neighborhood |
| MF | GO:0004180 | carboxypeptidase activity | IEP | Neighborhood |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| CC | GO:0005643 | nuclear pore | IEP | Neighborhood |
| CC | GO:0005875 | microtubule associated complex | IEP | Neighborhood |
| BP | GO:0006298 | mismatch repair | IEP | Neighborhood |
| BP | GO:0006405 | RNA export from nucleus | IEP | Neighborhood |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Neighborhood |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Neighborhood |
| BP | GO:0006928 | movement of cell or subcellular component | IEP | Neighborhood |
| BP | GO:0006950 | response to stress | IEP | Neighborhood |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
| BP | GO:0007017 | microtubule-based process | IEP | Neighborhood |
| BP | GO:0007018 | microtubule-based movement | IEP | Neighborhood |
| MF | GO:0008238 | exopeptidase activity | IEP | Neighborhood |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Neighborhood |
| BP | GO:0016973 | poly(A)+ mRNA export from nucleus | IEP | Neighborhood |
| CC | GO:0030896 | checkpoint clamp complex | IEP | Neighborhood |
| MF | GO:0030983 | mismatched DNA binding | IEP | Neighborhood |
| BP | GO:0031570 | DNA integrity checkpoint | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
| CC | GO:0044422 | organelle part | IEP | Neighborhood |
| CC | GO:0044427 | chromosomal part | IEP | Neighborhood |
| CC | GO:0044428 | nuclear part | IEP | Neighborhood |
| CC | GO:0044430 | cytoskeletal part | IEP | Neighborhood |
| CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
| CC | GO:0044454 | nuclear chromosome part | IEP | Neighborhood |
| BP | GO:0045786 | negative regulation of cell cycle | IEP | Neighborhood |
| BP | GO:0048519 | negative regulation of biological process | IEP | Neighborhood |
| BP | GO:0048523 | negative regulation of cellular process | IEP | Neighborhood |
| BP | GO:0050657 | nucleic acid transport | IEP | Neighborhood |
| BP | GO:0050658 | RNA transport | IEP | Neighborhood |
| BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
| BP | GO:0051028 | mRNA transport | IEP | Neighborhood |
| BP | GO:0051168 | nuclear export | IEP | Neighborhood |
| BP | GO:0051169 | nuclear transport | IEP | Neighborhood |
| BP | GO:0051236 | establishment of RNA localization | IEP | Neighborhood |
| BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood |
| BP | GO:0051726 | regulation of cell cycle | IEP | Neighborhood |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |