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  5. Smo88697

Smo88697


Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000000 (LandPlants) Phylogenetic Tree(s): OG_05_0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo88697
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Gb_04420 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.02 Archaeplastida
Gb_10152 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 Archaeplastida
Gb_17379 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.02 Archaeplastida
Gb_19299 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
Gb_23671 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 Archaeplastida
Gb_24515 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.02 Archaeplastida
Gb_30004 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.02 Archaeplastida
Gb_31266 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 Archaeplastida
Gb_37554 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.02 Archaeplastida
Gb_38232 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
Gb_38504 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 Archaeplastida
LOC_Os01g68490.1 No alias Putative pentatricopeptide repeat-containing protein... 0.01 Archaeplastida
LOC_Os02g49830.1 No alias Pentatricopeptide repeat-containing protein At3g22690... 0.01 Archaeplastida
LOC_Os03g63510.1 No alias Putative pentatricopeptide repeat-containing protein... 0.01 Archaeplastida
MA_141731g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 Archaeplastida
MA_43497g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.01 Archaeplastida
MA_83898g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.01 Archaeplastida
MA_95261g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.01 Archaeplastida
Smo102968 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.03 Archaeplastida
Smo110016 No alias Pentatricopeptide repeat-containing protein At1g06140,... 0.02 Archaeplastida
Smo121365 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.04 Archaeplastida
Smo42377 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.05 Archaeplastida
Smo80412 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 552 611
No external refs found!