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  5. Smo88870

Smo88870


Description : Vesicle trafficking.autophagosome formation.cargo recruitment.TSPO autophagic adapter protein


Gene families : OG0003242 (Archaeplastida) Phylogenetic Tree(s): OG0003242_tree ,
OG_05_0004213 (LandPlants) Phylogenetic Tree(s): OG_05_0004213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo88870
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00203220 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.cargo... 0.02 Archaeplastida
LOC_Os05g05930.1 No alias TSPO autophagosome autophagic adapter protein 0.04 Archaeplastida
MA_9106132g0010 No alias TSPO autophagosome autophagic adapter protein 0.02 Archaeplastida
Mp3g12180.1 No alias TSPO autophagosome autophagic adapter protein 0.07 Archaeplastida
Pp3c2_17540V3.1 No alias TSPO(outer membrane tryptophan-rich sensory protein)-related 0.05 Archaeplastida
Smo228213 No alias Vesicle trafficking.autophagosome formation.cargo... 0.03 Archaeplastida
Solyc09g074910.1.1 No alias TSPO autophagosome autophagic adapter protein 0.03 Archaeplastida
Zm00001e027500_P001 No alias TSPO autophagosome autophagic adapter protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004307 TspO_MBR 2 140
No external refs found!