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  5. Smo88878

Smo88878


Description : Cell cycle.interphase.DNA replication.preinitiation.MCM replicative DNA helicase complex.MCM5 component


Gene families : OG0006738 (Archaeplastida) Phylogenetic Tree(s): OG0006738_tree ,
OG_05_0007898 (LandPlants) Phylogenetic Tree(s): OG_05_0007898_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo88878
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00026p00049360 evm_27.TU.AmTr_v1... Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.04 Archaeplastida
AT2G07690 MCM5 Minichromosome maintenance (MCM2/3/5) family protein 0.03 Archaeplastida
Cre01.g023150 No alias Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.02 Archaeplastida
GSVIVT01001046001 No alias Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.09 Archaeplastida
Gb_09107 No alias DNA replication licensing factor MCM5 OS=Oryza sativa... 0.03 Archaeplastida
LOC_Os02g55410.1 No alias component MCM5 of MCM replicative DNA helicase complex 0.05 Archaeplastida
MA_10426777g0010 No alias component MCM5 of MCM replicative DNA helicase complex 0.06 Archaeplastida
Mp3g08120.1 No alias component MCM5 of MCM replicative DNA helicase complex 0.05 Archaeplastida
Pp3c1_32870V3.1 No alias Minichromosome maintenance (MCM2/3/5) family protein 0.02 Archaeplastida
Solyc07g005020.3.1 No alias component MCM5 of MCM replicative DNA helicase complex 0.04 Archaeplastida
Zm00001e016127_P001 No alias component MCM5 of MCM replicative DNA helicase complex 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
MF GO:0004017 adenylate kinase activity IEP Neighborhood
MF GO:0004097 catechol oxidase activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
MF GO:0050145 nucleoside monophosphate kinase activity IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR027925 MCM_N 32 126
No external refs found!