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Description : Cell wall.pectin.homogalacturonan.modification and degradation.pectin methylesterase
Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0000020 (LandPlants) Phylogenetic Tree(s): OG_05_0000020_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo89509 | |
| Cluster | HCCA: Cluster_29 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00230630 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
| AMTR_s00003p00238240 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
| AMTR_s00038p00046180 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
| AMTR_s00040p00188020 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
| AT1G53830 | ATPME2, PME2 | pectin methylesterase 2 | 0.03 | Archaeplastida | |
| AT1G53840 | PME1, ATPME1 | pectin methylesterase 1 | 0.02 | Archaeplastida | |
| AT2G26450 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
| AT3G05610 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
| AT3G10710 | RHS12 | root hair specific 12 | 0.03 | Archaeplastida | |
| AT4G33220 | PME44, ATPME44 | pectin methylesterase 44 | 0.02 | Archaeplastida | |
| AT5G04960 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
| AT5G04970 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
| AT5G27870 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
| AT5G51500 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
| GSVIVT01027652001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
| GSVIVT01037349001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
| Gb_06354 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
| Gb_10523 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
| Gb_18512 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
| Gb_21388 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
| Gb_28387 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
| LOC_Os03g18860.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
| LOC_Os11g36240.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
| MA_10433178g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
| MA_26888g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_648837g0010 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
| MA_84680g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
| Mp8g00060.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
| Mp8g09330.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
| Pp3c18_170V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
| Pp3c4_22420V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
| Pp3c8_3840V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
| Smo101118 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.01 | Archaeplastida | |
| Smo114014 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
| Solyc01g066420.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
| Solyc01g099940.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
| Solyc02g014300.2.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
| Solyc02g080200.4.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Solyc02g080220.3.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
| Solyc02g081990.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
| Solyc03g083870.4.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
| Solyc07g017560.4.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
| Solyc07g017600.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
| Solyc07g064170.3.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
| Solyc07g064180.4.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
| Solyc12g099410.2.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
| Zm00001e009863_P001 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
| Zm00001e017514_P001 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
| Zm00001e034231_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
| Zm00001e035932_P003 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
| Zm00001e041006_P001 | No alias | pectin methylesterase | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0030599 | pectinesterase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Neighborhood |
| MF | GO:0003746 | translation elongation factor activity | IEP | Neighborhood |
| MF | GO:0003924 | GTPase activity | IEP | Neighborhood |
| MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Neighborhood |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | Neighborhood |
| BP | GO:0006508 | proteolysis | IEP | Neighborhood |
| BP | GO:0006928 | movement of cell or subcellular component | IEP | Neighborhood |
| BP | GO:0007017 | microtubule-based process | IEP | Neighborhood |
| BP | GO:0007018 | microtubule-based movement | IEP | Neighborhood |
| BP | GO:0007049 | cell cycle | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| MF | GO:0008168 | methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008276 | protein methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Neighborhood |
| BP | GO:0009250 | glucan biosynthetic process | IEP | Neighborhood |
| CC | GO:0016020 | membrane | IEP | Neighborhood |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
| MF | GO:0016740 | transferase activity | IEP | Neighborhood |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Neighborhood |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Neighborhood |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
| MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0030243 | cellulose metabolic process | IEP | Neighborhood |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | Neighborhood |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Neighborhood |
| MF | GO:0042054 | histone methyltransferase activity | IEP | Neighborhood |
| BP | GO:0044042 | glucan metabolic process | IEP | Neighborhood |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | Neighborhood |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Neighborhood |
| BP | GO:0051321 | meiotic cell cycle | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000070 | Pectinesterase_cat | 27 | 322 |
| No external refs found! |