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  5. Smo90579

Smo90579


Description : ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis thaliana


Gene families : OG0005319 (Archaeplastida) Phylogenetic Tree(s): OG0005319_tree ,
OG_05_0007211 (LandPlants) Phylogenetic Tree(s): OG_05_0007211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo90579
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00112500 evm_27.TU.AmTr_v1... ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G27880 No alias DEAD/DEAH box RNA helicase family protein 0.03 Archaeplastida
Cpa|evm.model.tig00000789.41 No alias ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis thaliana 0.03 Archaeplastida
Cre15.g634701 No alias ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01010342001 No alias ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os04g40970.1 No alias ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis... 0.04 Archaeplastida
MA_373278g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc05g014690.3.1 No alias ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
CC GO:0005663 DNA replication factor C complex IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006760 folic acid-containing compound metabolic process IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Neighborhood
BP GO:0042558 pteridine-containing compound metabolic process IEP Neighborhood
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Neighborhood
MF GO:0043015 gamma-tubulin binding IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046653 tetrahydrofolate metabolic process IEP Neighborhood
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 148 309
No external refs found!