1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. Smo90744

Smo90744


Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.KNOX transcription factor


Gene families : OG0000263 (Archaeplastida) Phylogenetic Tree(s): OG0000263_tree ,
OG_05_0000128 (LandPlants) Phylogenetic Tree(s): OG_05_0000128_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo90744
Cluster HCCA: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00169620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AT1G70510 KNAT2, ATK1 KNOTTED-like from Arabidopsis thaliana 2 0.03 Archaeplastida
AT5G11060 KNAT4 KNOTTED1-like homeobox gene 4 0.02 Archaeplastida
LOC_Os02g08544.1 No alias transcription factor (KNOX) 0.02 Archaeplastida
MA_10428446g0010 No alias transcription factor (KNOX) 0.01 Archaeplastida
MA_114226g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c18_18750V3.1 No alias KNOTTED1-like homeobox gene 6 0.01 Archaeplastida
Pp3c19_5610V3.1 No alias No annotation 0.01 Archaeplastida
Pp3c19_5620V3.1 No alias KNOTTED-like from Arabidopsis thaliana 2 0.02 Archaeplastida
Pp3c21_10320V3.1 No alias KNOTTED-like from Arabidopsis thaliana 2 0.01 Archaeplastida
Smo135843 No alias RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
Solyc05g005090.4.1 No alias transcription factor (KNOX) 0.02 Archaeplastida
Zm00001e005547_P001 No alias transcription factor (KNOX) 0.04 Archaeplastida
Zm00001e011538_P001 No alias transcription factor (KNOX) 0.02 Archaeplastida
Zm00001e017489_P001 No alias transcription factor (KNOX) 0.01 Archaeplastida
Zm00001e027562_P001 No alias transcription factor (KNOX) 0.02 Archaeplastida
Zm00001e032761_P001 No alias transcription factor (KNOX) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR005539 ELK_dom 196 217
No external refs found!