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  5. Smo91359

Smo91359


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0000509 (Archaeplastida) Phylogenetic Tree(s): OG0000509_tree ,
OG_05_0000283 (LandPlants) Phylogenetic Tree(s): OG_05_0000283_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo91359
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AT3G06120 MUTE basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
GSVIVT01003437001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01021074001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01028719001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
LOC_Os02g52190.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os04g50090.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_120602g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_194157g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc09g091760.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e000161_P002 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e026696_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e041403_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 2 50
No external refs found!