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  5. Smo93784

Smo93784


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo93784
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00201260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT2G02820 MYB88, AtMYB88 myb domain protein 88 0.03 Archaeplastida
AT2G23290 MYB70, AtMYB70 myb domain protein 70 0.07 Archaeplastida
AT4G38620 ATMYB4, MYB4 myb domain protein 4 0.04 Archaeplastida
Cpa|evm.model.tig00000448.26 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
Cpa|evm.model.tig00021108.38 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01030708001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_20309 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_29520 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os04g43680.1 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10435612g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_8206949g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_93111g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_93127g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c5_2150V3.1 No alias myb domain protein 109 0.03 Archaeplastida
Solyc01g087130.4.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc12g099140.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 88 116
No external refs found!