Description : RNA processing.RNA modification.rRNA/tRNA methylation.TRM7-TRM732/TRM734 tRNA cytidine/guanosine-methyltransferase complex.TRM7 component
Gene families : OG0004995 (Archaeplastida) Phylogenetic Tree(s): OG0004995_tree ,
OG_05_0006518 (LandPlants) Phylogenetic Tree(s): OG_05_0006518_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Smo95614 | |
Cluster | HCCA: Cluster_35 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre03.g145907 | No alias | RNA processing.RNA modification.rRNA/tRNA... | 0.03 | Archaeplastida | |
LOC_Os06g49140.1 | No alias | component TRM7 of TRM7-TRM732/TRM734 tRNA... | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008168 | methyltransferase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEP | Neighborhood |
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0003747 | translation release factor activity | IEP | Neighborhood |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
BP | GO:0006415 | translational termination | IEP | Neighborhood |
BP | GO:0006766 | vitamin metabolic process | IEP | Neighborhood |
BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Neighborhood |
BP | GO:0006771 | riboflavin metabolic process | IEP | Neighborhood |
MF | GO:0008079 | translation termination factor activity | IEP | Neighborhood |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
BP | GO:0009110 | vitamin biosynthetic process | IEP | Neighborhood |
BP | GO:0009231 | riboflavin biosynthetic process | IEP | Neighborhood |
MF | GO:0016597 | amino acid binding | IEP | Neighborhood |
MF | GO:0016859 | cis-trans isomerase activity | IEP | Neighborhood |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Neighborhood |
BP | GO:0022411 | cellular component disassembly | IEP | Neighborhood |
CC | GO:0030117 | membrane coat | IEP | Neighborhood |
CC | GO:0030120 | vesicle coat | IEP | Neighborhood |
CC | GO:0030127 | COPII vesicle coat | IEP | Neighborhood |
MF | GO:0031406 | carboxylic acid binding | IEP | Neighborhood |
BP | GO:0032984 | protein-containing complex disassembly | IEP | Neighborhood |
BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Neighborhood |
BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Neighborhood |
MF | GO:0043177 | organic acid binding | IEP | Neighborhood |
BP | GO:0043624 | cellular protein complex disassembly | IEP | Neighborhood |
BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
BP | GO:0044281 | small molecule metabolic process | IEP | Neighborhood |
CC | GO:0044433 | cytoplasmic vesicle part | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002877 | rRNA_MeTrfase_FtsJ_dom | 21 | 206 |
No external refs found! |