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  4. Sequence
  5. Smo96268

Smo96268


Description : 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea


Gene families : OG0007460 (Archaeplastida) Phylogenetic Tree(s): OG0007460_tree ,
OG_05_0007913 (LandPlants) Phylogenetic Tree(s): OG_05_0007913_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo96268
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00020p00012640 evm_27.TU.AmTr_v1... 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea 0.03 Archaeplastida
AT3G23700 No alias Nucleic acid-binding proteins superfamily 0.05 Archaeplastida
Cre03.g148950 No alias 30S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01031632001 No alias 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea 0.04 Archaeplastida
Gb_13624 No alias 30S ribosomal protein S1, chloroplastic OS=Spinacia... 0.05 Archaeplastida
LOC_Os03g62780.1 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_37826g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp6g19820.1 No alias 30S ribosomal protein S1, chloroplastic OS=Spinacia... 0.04 Archaeplastida
Pp3c14_26600V3.1 No alias Nucleic acid-binding proteins superfamily 0.03 Archaeplastida
Solyc09g097910.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e006347_P003 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006865 amino acid transport IEP Neighborhood
MF GO:0008199 ferric iron binding IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0009975 cyclase activity IEP Neighborhood
MF GO:0009976 tocopherol cyclase activity IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
MF GO:0098809 nitrite reductase activity IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
BP GO:1903825 organic acid transmembrane transport IEP Neighborhood
BP GO:1905039 carboxylic acid transmembrane transport IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003029 S1_domain 10 85
No external refs found!