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  5. Smo97289

Smo97289


Description : Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0024305 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo97289
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00257020 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.02 Archaeplastida
AMTR_s00012p00251890 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g59600... 0.04 Archaeplastida
AMTR_s00092p00078040 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.02 Archaeplastida
AT3G22690 No alias CONTAINS InterPro DOMAIN/s: Protein of unknown function... 0.02 Archaeplastida
Pp3c17_4890V3.1 No alias mitochondrial editing factor 22 0.02 Archaeplastida
Smo78092 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.05 Archaeplastida
Smo99647 No alias Pentatricopeptide repeat-containing protein At5g27110... 0.05 Archaeplastida
Solyc02g065560.1.1 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.06 Archaeplastida
Zm00001e006544_P001 No alias No annotation 0.02 Archaeplastida
Zm00001e011748_P001 No alias Pentatricopeptide repeat-containing protein At4g21065... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004417 hydroxyethylthiazole kinase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 6 52
No external refs found!